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Detailed information on CNT3099667


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000336, E-value = 1e-152

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021542Oryza rufipogonCitrullus lanatus11.1642.9595.31256forward
CNT30488794Oryza rufipogonOlea europaea6.1965.4495.77142forward
CNT30187493Oryza rufipogonSecale cereale11.5658.3799.62265forward
CNT30401101Oryza rufipogonTriticum turgidum13.5225.4797.74310forward
CNT30543276Oryza rufipogonBrassica napus11.2121.5292.61257forward
CNT30435788Oryza rufipogonAegilops tauschii11.0383.598.42253forward
CNT30664530Oryza rufipogonTriticum dicoccoides10.4767.04100240forward
CNT3059312Oryza rufipogonArabidopsis lyrata14.9162.4195.61342forward
CNT30228621Oryza rufipogonAnanas comosus15.9287.7497.26365reverse complement
CNT30623007Oryza rufipogonDaucus carota11.7757.9494.07270forward
CNT30680154Oryza rufipogonTriticum urartu15.2210098.85349forward
CNT30153781Oryza rufipogonPrunus persica15.1331.0995.1347forward
CNT3058010Oryza rufipogonAmborella trichopoda4.1430.6594.7495forward
CNT30557320Oryza rufipogonPanicum hallii13.5269.8298.39310forward
CNT30111895Oryza rufipogonFicus carica3.882591.0189forward
CNT30335348Oryza rufipogonCynara cardunculus9.5160.2288.53218forward

Expression of CNT3099667

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MKRFHKNSRRIENEVFILYMPNHELVTASNLRKVPIIRDISLLF*

>peptide 2 (41 aa)
MLASGGRLSPGSPAASSDPGWVRGRSERLPSRIQTCSQGAQ*

>peptide 3 (89 aa)
MNRTSTSSVTPTALTALYPNPTCSGPGSSRISSSVSGPWKLGGIRLGLIENSISFLSLLTPKKNIVEVRSTLLSLYILSKKVPRVNCFE*

>peptide 4 (30 aa)
MLACQAMCFLSFQNSMYSFAFLPGLPRKGV*

Sequence

>CNT3099667
ACAATAAGAAATTGAAAGATTTCGTTGAAATTGTTCGTTTGGAAATTTCCTGAAAAGCTAATTATAGGTTCTTCTCTCCATCGGAACAATAGGGCCGTTA
TGCTTATTACTAAACTTGTTGAAGAGATGAAATAGAACCAAGGTCCATCTTTTTGATCAGAGGTTAAATCGATCATCAGAAGAAGAATTAGGCCAAAAAT
TAGGATACATTCTGGGAAAATGAAACTTCCCTGGAAGAGAAGCAAATGAAACGCTTTCATAAAAATTCTCGTAGAATCGAGAATGAAGTTTTCATTCTAT
ACATGCCAAATCATGAATTAGTAACTGCATCCAATCTCCGAAAAGTCCCGATTATCAGAGACATTTCATTACTGTTCTGAATATACAAGGCAATGTTTCA
AGACTGACATTCAATGGGAAAGACCAACATAGTTAAGTTGGTAATAGGTCATAGGTAACCAAATACATAGATAGTACTTCTATATCGTTCGTGCAGAAAA
AAGAGTATCCTTAGGGTACTAATTAGATAAAATATATTATCCCCCATACTTTTAGTAGAAGGTTGCATTTCATATCCGGTGAGACAAGAAAAGGCCTTCG
GTACTATTATAGTATAGAAGTTCGGTACCCTTTTAATACCATGCTATTTCAATACCTGACTATTTAAATAGCTGACTTTTAGGCACCAGTAACCATAACT
TATCAGTCATCCTATTGTTGATGAATCAAAGCGAGATCAGATTGCTCTTGATGACGAGGGTTGAAGAGGCTTTCTATTGATCCACCTACTTTCAACTGAA
CAGTAGTTAGTTAAGGAGTGCCGGGTTTGCTTGATAAGGGATTCTTGTTTTGACTGCTACATTAAGGGCAACGCAACTACCTCTCCTGCTTTCAATTGCT
AAGGATTCCTCCTTCCCCATTGTCCTCTCCTACCCGCCTTTCCCACATCCATCAAAAGGATGCTCGCTTGTCAAGCTATGTGCTTTCTTTCCTTTCAAAA
CTCTATGTATTCATTTGCTTTCTTACCAGGCCTACCCAGGAAAGGGGTATAGATAGAAGGAGGGATCCTCCGACCATAGGTCTATTGAATCGAAAAAACA
CTATTTTTTATCCAGCAGCTGCTTTTATTTTCTCTACGAAGAGAGTGGCTAGCTAGCTTCTTTGCCAACTTCGAGTGACTGTGACTACTCTTACTGGCCG
TAACTCACAGAAGAGGCAGGAAGACTTTTTACTCAAAATTGATAAGCGATCAAACCCTTAGTTGTAACCTGCACACCAAGAATAGATATCTATGTTAGCT
AGCGGGGGCAGGCTTTCCCCTGGTAGTCCCGCAGCGTCCTCTGACCCGGGTTGGGTTAGGGGAAGATCCGAGCGATTGCCTTCGCGGATCCAAACGTGCT
CACAAGGCGCACAATAAGAATAAGACCAATAGAGACTTCATAAGGGACCATTTGAGCTGCAGATCGTAATGCTCCTAGAAAGGCATATTTCGAATATAGA
GGACGTTCCCAACAATCCACGAGAATATCATACCCAACTATGAACCGTACGAGCACATCCTCTGTCACCCCCACCGCGCTTACGGCTCTATACCCCAACC
CAACTTGCTCTGGCCCTGGGTCCTCCCGCATCTCTTCCTCGGTAAGCGGACCGTGGAAGCTGGGGGGTATCCGCTTGGGACTGATAGAGAACAGCATATC
TTTTTTGTCCCTCCTGACCCCTAAAAAAAATATAGTTGAAGTCCGGTCGACGTTGTTATCCTTATATATTCTGTCAAAGAAAGTCCCTCGCGTAAATTGC
TTTGAATAGGTAAATCAATCATTTGTCCTTGAGGATCCGCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAGCCCAGCGTTTTTATTTGATCCAGTATATGGGATGTATATCCCATTCCGAAATG
ATCTATTAATCTGCTAATAAGTCCGCCTTTTTCATCTTCCGTAGGGGCCTTTAGTCTTTTGATTAGAGTAGAGGTCGCGACAGAGCAGAGCGTACCGCCC
TGCCATAGTCGCGAGGATCTTAATAGTCGGTCGCGACTGTTGTCATAGTCAACGACGGTTGAAACTTCCAGGAAAAAACTTCGAATTGGGAGGGCGATCC
TCCCGGTGAGCTGACCGTACCCCAAACCGACACAGGTGAACAAGTAGAGTATACTAGGGCGCGTCGAGAGAACCATGTCGAAGGAACTCGGCG