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Detailed information on CNT3099666


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690750Oryza rufipogonOryza sativa62.5358.54100312forward
CNT30553830Oryza rufipogonOryza glaberrima60.1248.2394.33300forward
CNT30369411Oryza rufipogonOryza glumipatula59.7248.6997.99298forward

Expression of CNT3099666

Peptides detected in this lncRNA

>peptide 1 (66 aa)
SITLQPLQTLVAITPMAAAPSPQVQPSPSSATPARLLESRSFKKQGKQEKRRKKEREAKVGDFLGT*

>peptide 2 (37 aa)
IDNPAAATNPSRHHPNGCCAVAAGSAIAVQRHSCSTP*

Sequence

>CNT3099666
GATCGATAACCCTGCAGCCGCTACAAACCCTAGTCGCCATCACCCCAATGGCTGCTGCGCCGTCGCCGCAGGTTCAGCCATCGCCGTCCAGCGCCACTCC
TGCTCGACTCCTTGAGAGCAGGAGTTTCAAGAAGCAGGGAAAGCAGGAGAAAAGAAGGAAAAAGGAAAGAGAGGCAAAAGTTGGGGATTTTCTGGGTACC
TAATGATATTGATTGGCATGGGACGGGAGTAGCACCCTTGAACTACACATTATTATTGCACACTATTGAAATTTACTTTTAGACTATGTTTCTACTTAGC
ATAAGTTTTGCGTAGAACTTGTGAAGGTCATTTAAAGTTCTGGTCCTTATTTTCACGTGGAATTTGTGGAGATAGGATGGGTTGGATTGTGTGGTTTATA
TCGTTATTGAGTTATCTTGTAACTGCCTGTCATGGATGTCCGTACTTTTAGGTTACTCTGCCGAAATTTCTAATAATTTTGGGAGTTGGTGGTTTTTTT