Detailed information on CNT3099641


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552306Oryza rufipogonOryza glaberrima78.1553.72100347forward
CNT30115779Oryza rufipogonOryza nivara74.162.67100329forward

Expression of CNT3099641

Peptides detected in this lncRNA

>peptide 1 (83 aa)
GTNQIKIILHNQVHCTSFINQPDNIVLHNLNERSKYSGTRKEENVARLTAACMKAMDLTAVARRRSTLTCRGRSWWRRPMRCC*

Sequence

>CNT3099641
GGAACAAATCAGATAAAAATTATTTTACACAATCAGGTCCATTGTACTTCTTTCATCAACCAACCAGATAACATTGTTTTACACAATCTGAACGAACGAA
GCAAATATTCGGGTACGCGGAAAGAGGAGAACGTCGCGCGTCTCACCGCAGCCTGCATGAAAGCAATGGACCTCACCGCCGTTGCTCGCCGGAGATCCAC
ACTCACTTGCCGGGGACGAAGTTGGTGGCGTAGGCCCATGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCCAGGTTCTCCAGTGGCCCCTTGCCGG
TGACGATGGCCTGGACGAAGAACCCGAACATGGAGAACATGGCGAGGAGAGTGCCATGGTGGACGCCGCCATTGACGCGAGCCTAGGACTAGGAGGAGAT
GGCCACAGATGCTTTTGGAATGTGTGTCTTTTGAGCTCGTGAGC