Detailed information on CNT3099611


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690113Oryza rufipogonOryza sativa69.65100100280forward
CNT30574790Oryza rufipogonOryza barthii86.0777.58100346forward

Expression of CNT3099611

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MQAKFSKKSKRKKATQPIRAAKQSMEQAAIKMDRFRSAASSLITSTPQLVLKQTRHKQDYQNIHKFRP*

Sequence

>CNT3099611
TTATTTTTTCAAATAAAACGAACGGTCAAAGATTTGGGACGGAGGGAGGGAGTACACGGCTACATGGGTTCCAAGAAAACATGAGCTGATTCCAACGGAT
GCAAGCAAAATTCAGCAAAAAATCGAAAAGAAAAAAGGCAACCCAACCCATAAGGGCAGCAAAGCAGAGCATGGAACAAGCTGCGATTAAGATGGACAGG
TTCAGAAGTGCGGCATCCAGCCTAATAACATCCACCCCCCAGCTGGTACTTAAACAAACACGACATAAACAAGACTACCAAAACATCCACAAGTTCAGGC
CATAACATAGCAGCCAAGCGGCTGCTCAGCAGAAGAACATGGAGCTCCTGACTTTGTTATGCAGGCGAGGCAGCTCGGGCACCGGAGCGCTGCCCGCCGA
GG