Detailed information on CNT3099603


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30683762Oryza rufipogonTriticum urartu11.7145.9392.74372reverse complement
CNT30577864Oryza rufipogonOryza barthii3.7121.15100118forward

Expression of CNT3099603

Peptides detected in this lncRNA

>peptide 1 (84 aa)
MLNMVLNHFNGKSHRFNNNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPNQLKQMQDPKYSTPVRLRRTEGSSPVYP*

>peptide 2 (79 aa)
MSQPILTEFLRSRTTKPQNQIKMSPTRPDFNYIFFRGQEGQKRYAVFYQSQADTPQLPRSAYRGRDAGGPRARASWVGV*

>peptide 3 (49 aa)
MSLKQIRFVSVFFSDEPADPNRIFEEPDDEASKSDKDVSDATGLQLYFF*

>peptide 4 (46 aa)
MILARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPTLGYV*

>peptide 5 (29 aa)
MIAWPFLLCYHLINFRESSPRGQSFLSLY*

>peptide 6 (52 aa)
MLFSISPKRIPPSFHGPLTEEEMREDPGPEQVGLGYRAVSAVGVTEDVLVRFI

Sequence

>CNT3099603
GGTCCAAAGATACTTTTAAGGCCGACCACTACATAGGAGCGATAGGAAGCCAAGCCGTCAAAAGGAAAGGCGAGCAGCCCTGGCTTTGATGACATCCCGA
CCTGTAGAAAAAGGATCAAGCAGAAGGAAGATCTGCTAAAGATTTTGATGCCCTTGCAAAACAGAGTCCTAAAAAAGGAAGTGGGTTGGGCTCTTATCTT
AAGTGGGATGTTCGGCCATTGGTTTCAGCACTGACCGTAAGTCTGAATCTGATGAAACTTAAGTGCCTTTTACTTTGGTTCGAAAGATGACCGTCCCATT
AGCCAGCCTCATCCACAGCTTCGCTAGATTTCTTTGATCTCGTGCATTTGCAACGCGGTGCTCGTAATTTCCCCAAGAGGTTGCTATGGCTTGGAGGTCT
AACGGACTTTCGTCCTTCGACGCCTATAGGCGGCTTCGCTATCGCTCATGACTTGGTATAGAAATCTCTCCGTGTAGTGTAGTGGTCGGCCTTCCCATCT
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAAGGCTGGGGGAGCCCTGTGAAGGCAAGCCATGTGTTTGTAGGGGTTATGAGGAGTGAATGGAAATGAATCATCTTGAACAATACCAGTCTGTAGCACA
CCCAGCTAAGAGTTGGACCAATACGTTGGAATAGATAGCTCAGTTGCTTACTTTAAAGCTTTAGATAGCTCTGTTTGTTACAAGCAAAGAAGAAAAGATA
TAGCTTTTGTTTAACACCTGCTACGAAAGGTACGCAGACGACATGGTCTTTGGGGATTCCCTAACTGGGACCCGAGATATATATTGCTGAGAGGTTTGCA
ACTTAGGATTTCAGTACTGTGTTGCTTGGTCCAGTCCGTCCGGGGTCATGTCCTTCCCATTCGAACTTCTTTCCACTAATCTAATGGTTTCATTCTCCCG
GTTATGATACTAGCAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNCGATCCTACCTTGGGTTATGTTTAACAGGGATGGTCAGTGAACTTCTATTGGTTTCAAAGGAGGATAGAGATCCATTGGGG
AAGGCTCGAAAGGTTATTCGATATCAAGGTTGACCCTCGACGCGCCGCAGCCACTATTTTTACTCCTTTTATGCAATTATGAACGAAACTTTCTCGATTC
CAATGCAACTTATCCTTTTGGAGTTGACGTAACAAACTACGCGAGCCCCCCGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTAAGGAAGCCTGATAATCATATAGGCAAAAGGCACCCTGTCCCA
GACAAACCAGACAGGCAGCAAATTTCACTAAGGCAGTAAAGCATTCTGATACTCCTATACAGACAAGGCTGTAACCCAATCCGACCAGCCTCTCGGAATA
CCGAATAGGCAAAGTACGGAATCAAAATCAAGGGGACAAGGAGCCTACCAAGTACGGCAACAAAAGAAAGAAAGACGAGACAGCGCTACGCTTGTTCACC
AAAGGTCAAGATATCCTACTTAACTTTCTTACCACTGTTTCGCATGCCCGGGACATTGCTTGCCTAATATGATAGCTTGGCCTTTTCTTCTCTGCTACCA
CCTTATTAACTTCCGAGAATCCTCCCCGAGAGGACAGTCCTTCCTCTCCCTTTACTAGATTAGTCTCATTCCGGCAATTCTTCTTATCTTCATTATATTA
TTCCCTTTTCTTCTTTTTAGTGATCAACTCATTGATTCACAACTATTCTCACTCTTCTTCATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTCTTCATTATATTATTCCCTTCGTGTGTGCAACG
AATTGCATTAGATGTTAAAATCTAGAGTGAAGAGATAGACTCTCCATATTAACGTTGTCGCTCTCTAGTCAGACAGCTAGAGCACGGTTATTACCAACGG
GTAGTGACAACCATACAAGAAAAATCCCAACTAACATATATGACAGTATAGAAAGAAAGAAAATGTTAAACATGGTTTTAAACCATTTTAACGGTAAATC
GCACAGGTTCAACAACAACAACGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTGCACCTAATCAACTGAAGCAGATGCAGGATCCGAAGTATTCGACTCCGGTCCGGCTCAGACGAACCGAGGGATCAT
CTCCTGTCTATCCCTAGTCACAGCGAAAGACTTCTACTTGATAGCTATACCTCTGCCCATAAAAAAGTACTTTTTGATCTCCCCCACTATCGGATGGACT
TCTTGCTCAGTTTCGTGGTCAGAAGATCAACATTCTGAGTAGAATTCTTTTGTCTTGAACCCTTCTTGGTTCATTCATTCCTGAGTTCTCGCTTCGCCCC
TTCTCCCGCTTGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCTTCGACATCAATTTCAGTCTGATTAGATATGTCATTGAAACAAATCCGTTTTGTCTCTGTTTTCTTTTCGGATGAGCCAGCCGA
TCCTAACAGAATTTTTGAGGAGCCGGACGACGAAGCCTCAAAATCAGATAAAGATGTCTCCGACGCGACCGGACTTCAACTATATTTTTTTTAGGGGTCA
GGAGGGACAAAAAAGATATGCTGTTTTCTATCAGTCCCAAGCGGATACCCCCCAGCTTCCACGGTCCGCTTACCGAGGAAGAGATGCGGGAGGACCCAGG
GCCAGAGCAAGTTGGGTTGGGGTATAGAGCCGTAAGCGCGGTGGGGGTGACAGAGGATGTGCTCGTACGGTTCATAGT