Detailed information on CNT3099567


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555302Oryza rufipogonOryza glaberrima10040.4996.57466forward
CNT30369380Oryza rufipogonOryza glumipatula10064.199.36466forward
CNT30108076Oryza rufipogonOryza longistaminata10064.0198.5466forward
CNT30578188Oryza rufipogonOryza barthii10045.2997466forward

Expression of CNT3099567

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MPTNSNFLQLHLTVDSNGHRVDPWIHQGF*

>peptide 2 (80 aa)
MRAQDADEFELLATALNSRFQRPSGGSLDSSRFLNVGAEVSSKMPSDGSLDSSRSPNVGAEGSSKMLVVPAFCNCDGTDT*

>peptide 3 (32 aa)
MLAPKYHPRCHPMDPWIHQGLRMLAPKDHPKC*

Sequence

>CNT3099567
GCACAAGCGTCGCCACACGCGAGCATACCACTGCCTGTGATCTAGCTGCATCAAGTGCATGAGCTTGGATATTGGTGCATGAGAGCACAGGATGCCGACG
AATTCGAACTTCTTGCAACTGCACTTAACAGTAGATTCCAACGGCCATCGGGTGGATCCTTGGATTCATCAAGGTTTCTGAATGTTGGCGCCGAAGTATC
ATCCAAGATGCCATCCGATGGATCCTTGGATTCATCAAGGTCTCCGAATGTTGGCGCCGAAGGATCATCCAAAATGCTAGTCGTTCCTGCATTCTGCAAT
TGTGATGGCACTGATACATGAATGGGAAATTCATCTGCCATGGTGCCAAGATTTGGCGGAGGCTTGTATTATTGTGGAGTAGCAATATGTGGATTTTAAG
ATAAAATAGTTGTGTAGTCTTGCGTATTAACCAGCTCAGTTATTTCTCCCCGCCACCAATTTTATT