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Detailed information on CNT3099558


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONORUT000293, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596384Oryza rufipogonOryza meridionalis83.2570.897.84696forward
CNT30370717Oryza rufipogonOryza glumipatula11.7220.2994.998reverse complement
CNT30604359Oryza rufipogonOryza punctata13.422.0989.29112forward

Expression of CNT3099558

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MSTCWKDLVVYFQLCVASPSSLTQAAQNNENSSLHQKLGLGPSIITAH*

Sequence

>CNT3099558
CTTAATTATCAGGAATATGGGAGAGGAACCAAATCGCCAGCAGCACTAGCAGCGCTGATTTGATGAAGTCAATGCTCTTCACTCCGGAGGGCAAACGGGG
CAAATGAGTACTTGTTGGAAAGATCTCGTCGTCTACTTTCAGCTATGTGTGGCCTCACCATCAAGTTTGACCCAGGCTGCTCAGAATAACGAAAATAGTT
CTTTACATCAGAAACTTGGGCTTGGGCCTAGTATCATTACAGCCCATTAGAGGTCCACAAAACCTAGGGTTTGCTCCCACCTCCTCTCCTGGTCATTCCT
CCACCTATATAAACTCCTAGCAGCCACCATTTTGCACTTTGGGTTTTGTTTTGATGTAAGTTTAGCTGCAGCTACTTCCTTGTACTCGCGTGTGTCGGCT
AGACCACCCGGATACTTGTATTCAGAACCCCATTTTGGTTTGTTTAAGTTTCATCATTTGACAAGTGCCGTGAGCTGTTTCCTTGTCAACTTGTTCTTGC
TTGTTCTTCGATTGCTTGCAGGTTCAAGGTTGTTCTTGGCACGGCAAGAACAGCAACAACGTGGAGTCGGTGTACCGGTTGCTAAGGCGCAACACCCCTG
TGGTAGTTGTAGTCGGACCGCCAACGTCGTATCCTTCGCCAAATCGAAGTTTATCCTCCTCTCATCGAAAGATCGGGAACCCCCGTTGCTGCATCACAAG
TGCAAGAGTTACTCGACAAGGGTCGTGCTCCACCAGATTGGGGCGCACCCCACATGGGCCCCACTTGGGCCGGGGTCCCAAACGAAGTTACAAGCCCAAA
GGCCCATGACAGGTGACACAACACCTTGTTGCTTCA