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Detailed information on CNT3099528


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0JR25|IBBR_ORYSJ, E-value = 1e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30575072Oryza rufipogonOryza barthii32.44101.5995.69255forward

Expression of CNT3099528

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MSGPGNGPGASWHTSHCATHWLGSSSSLQRHCGGLIFSGSCSMLSQHFHGLFVVGACCADPPSVGRRMVLVVVS

>peptide 2 (30 aa)
ARDHSLFNVLFTMTAQHGNIYSFILLLVTG*

Sequence

>CNT3099528
GCTAGAGATCACTCATTATTCAACGTATTATTTACGATGACAGCGCAACATGGCAACATTTATTCATTTATTTTGCTCTTGGTCACTGGCTAGACCATCG
TTCACACGAGACAACACACAAATTTAACACGTAATTAAGCTAAGCGAGTTGGAGCACAAGCACTCTCAAGCTATAGCAGAGCTCTGAATATGGAGCTAGC
TAGCAACACTGAATGATCGAACGAACGATCAGCTAGCTGCTAGCTAGGGCGAGTTTTATTGACGGACACAGATCGATCGATCGATCATATATATATCGAT
CTGAAGCTAGTTCTCCGTGCACGAGTGTTTGCACTTGGGCCCTGGCTGGCCGGTGAACTGGTCCTGGCAGACGTAGCGAGGAGGCTTCGACGACTTCACC
CGCTTGCAATCCTTGCACGCGGCGGCGCACTTCTTCACCCTGTCGTTGCAGCGGCAGATCGGAGGGATCGACCTGGTGCAGGTGGTGTTGGTGCAGCAAT
CCCCCCACGGCCGCGGCGTGCAGAAGGGGCCCGGGTCGGCGCCCCAGTAGACGTCGCTGCAGATGAGCGGCCCCGGGAACGGCCCCGGCGCCTCCTGGCA
CACCTCGCACTGTGCCACGCACTGGCTGGGCTCCAGCTCGTCGTTGCAGCGCCACTGCGGCGGGTTGATCTTCTCCGGCAGCTGCTCGATGTTGTCGCAG
CACTTCCACGGCCTCTTCGTCGTCGGCGCCTGCTGTGCTGATCCTCCGTCGGTCGGGAGGCGTATGGTCTTGGTGGTGGTGTCTTC