Detailed information on CNT3097364


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 2e-174

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30637410Solanum tuberosumCapsicum annuum99.2164.7192.271126forward
CNT30330418Solanum tuberosumDioscorea rotundata74.9884.9382.02851forward
CNT30334109Solanum tuberosumCynara cardunculus99.5670.3682.041130forward

Expression of CNT3097364

Peptides detected in this lncRNA

>peptide 1 (58 aa)
EEQGEELTLSECYSQQGCDHPPAAYQQKSTSAGLVGYPPYPESSPSHYQWYLSSPPPR*

>peptide 2 (55 aa)
MSSQKSAYHPLGAAPNGELIPFECCNLLESFHPQAVSQQKSTSAGQVGCLPYLEF*

>peptide 3 (40 aa)
MVSELSTSRVMVFPVNVFTKICMPPRRRRTRWSVDSFWML*

>peptide 4 (40 aa)
MVSELSTSKVIVFPVSVLTKICIPPLKRSTKWSVDSFWIL*

>peptide 5 (37 aa)
MVSELSTSRVIVFPVNVFTKICIPPLRRSTKWRVDSF*

>peptide 6 (57 aa)
MFSQRSACHHADEGQGGVWTPFGCCSQLEFFHPPTVYRQRSISADLEEFLPYLGFLP*

Sequence

>CNT3097364
CGAAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTATAGTCAGCAAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGT
CTGGTGGGATACCCTCCTTATCCTGAATCTTCGCCTTCACATTATCAATGGTATCTGAGCTCTCCACCTCCAAGGTAATCGTCTTTCCAGTAAGTGTCTT
GACAAAGATCTGCATTCCTCCTCTCAAACGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATATTGTAATCAGCAAGAGTCCTACCATCCTCAAGCTGC
TTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAACTTTCTACCTCCA
GGGTGATTGTCTTCCCAGTCAATGTCTTCACAAAAATCTGCATACCACCCCTTAGGCGCAGCACCAAATGGAGAGTTGATTCCTTTTGAATGTTGTAATC
TGCTAGAGTCCTTCCATCCTCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATGCCTTCCTTATCTTGAATTTTAGCCTTGACATTG
TCGATGGTGTCAGAACTCTCAACCTCAAGGGTGATGGTCTTCCCTGTCAATGTTTTCACAAAGATCTGCATGCCACCACGCAGACGAAGGACAAGGTGGA
GTGTGGACTCCTTTTGGATGTTGTAGTCAGCTAGAGTTCTTCCATCCTCCAACTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGAGGAATTCCTTC
CTTATCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACCTCAAGAGTAATTGTCTTCCCAGTCAAGGTTTTCACAAAGATCTGCATG
CCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGAGTTCTACCGTCCTCTAATTGCTTTCCAGCAAAGATCA
GCCTTTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTGCCTTAACATTATCGATTGTGTCAGAACTCTCAACCTCGAGAGTTATGGTCTTGCC
AGTAAGGGTCTTAACAAAGATTTGCATCTATAATT