Detailed information on CNT3097262


BLAST search results

BLAST vs Swiss-Prot:
sp|P69322|UBIQP_PEA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30532887Solanum tuberosumEucalyptus grandis96.7741.1482.491108forward
CNT30311185Solanum tuberosumCamelina sativa96.1683.1681.561101forward

Expression of CNT3097262

Peptides detected in this lncRNA

>peptide 1 (58 aa)
EEQGEELTLSECYSQQGCDHPPAAYQQKSTSAGLVGYPPYPESSPSHYQWYLSSPPPR*

>peptide 2 (37 aa)
MVSELSTSRVIVFPVNVFTKICIPPLRRSTKWRVDSF*

>peptide 3 (40 aa)
MVSELSTSKVIVFPVSVLTKICIPPLKRSTKWSVDSFWIL*

>peptide 4 (55 aa)
MSSQKSAYHPLGAAPNGELIPFECCNLLESFHPQAVSQQKSTSAGQVGCLPYLEF*

>peptide 5 (57 aa)
MSSQKSAYHLADEGQGGGWTPSEYCSQQEYDHPQVAFQQKSTFAGLEECPPCPEFLP*

>peptide 6 (37 aa)
MVSELSTSRVMVFPVNVFTKICIPPRRRRTRWRVDSF*

Sequence

>CNT3097262
CGAAGAACAAGGTGAAGAGTTGACTCTTTCTGAATGTTATAGTCAGCAAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAAATCAACCTCTGCTGGT
CTGGTGGGATACCCTCCTTATCCTGAATCTTCGCCTTCACATTATCAATGGTATCTGAGCTCTCCACCTCCAAGGTAATCGTCTTTCCAGTAAGTGTCTT
GACAAAGATCTGCATTCCTCCTCTCAAACGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATATTGTAATCAGCAAGAGTCCTACCATCCTCAAGCTGC
TTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGAATCCCTTCTTTGTCTTGGATCTTTGCCTTCACATTATCAATGGTGTCTGAACTTTCTACCTCCA
GGGTGATTGTCTTCCCAGTCAATGTCTTCACAAAAATCTGCATACCACCCCTTAGGCGCAGCACCAAATGGAGAGTTGATTCCTTTTGAATGTTGTAATC
TGCTAGAGTCCTTCCATCCTCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATGCCTTCCTTATCTTGAATTTTAGCCTTGACATTG
TCGATGGTGTCAGAACTCTCAACCTCAAGGGTGATGGTCTTCCCTGTCAATGTCTTCACAAAAATCTGCATACCACCTCGCAGACGAAGGACAAGGTGGA
GGGTGGACTCCTTCTGAATATTGTAGTCAGCAAGAGTACGACCATCCTCAAGTTGCTTTCCAGCAAAAATCAACCTTTGCTGGTCTGGAGGAATGCCCTC
CTTGTCCTGAATTTTTGCCTTAACATTGTCAATAGTGTCTGAGCTTTCAACCTCGAGGGTAATAGTCTTTCCAGTCAAGGTTTTCACAAAGATCTGCATG
CCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCTGCAAGAGTTCTACCGTCCTCTAATTGCTTTCCAGCAAAGATCA
GCCTTTGCTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTGCCTTAACATTATCGATTGTGTCAGAACTCTCAACCTCGAGAGTTATGGTCTTGCC
AGTAAGGGTCTTAACAAAGATTTGCATCTATAATTAATCAAAAAG