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Detailed information on CNT3097189


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30379330Solanum tuberosumManihot esculenta17.0925.385.94128forward
CNT30503815Solanum tuberosumNicotiana attenuata22.8356.6285.96171forward
CNT30562839Solanum tuberosumActinidia chinensis23.127.579.19173forward
CNT30171710Solanum tuberosumTrifolium pratense14.2941.1583.18107forward
CNT3074932Solanum tuberosumBrassica juncea9.6122.7886.1172forward
CNT30643000Solanum tuberosumCannabis sativa15.7547.284.75118forward

Expression of CNT3097189

Peptides detected in this lncRNA

>peptide 1 (48 aa)
MLPYPRSFSRVIFGCSKVGGPSLEFKSLSPICSIPVPETHFLTSSSLLT

Sequence

>CNT3097189
CTCTAGACCGGTTATTGCACCCGAGTCCGAGCAACATAGATATTGATTTTACTTAATTTGCAGATCATAACCCTTTGAGTGCACAGAGGGAGTCATTTAC
AAAGCAAATATATTGAAATTCCAAATCAAGAAGTTGATTACAGAAGAATATAATGACAAAAACTGAAAACAAAAGATTATTTGGAGTTTGTATTCCCTTA
ACAGTGGAACACAACTGATTTACATAATAATATTAAACAGTTCAGTCACATTCTATAGCTACCCTCACAAATTGCCTCAAAAAAGTTGAAGAAATAAAAT
ACGTCATCACCCCTGGAAGTTGAATCATTAGAGACTTCAAGCAACAGGACGCGCTTTTTTCCCCTGCATCCACACAATAATGAAAACTTTTTAGAAATTT
TTGTTCTCCGATTTTCAATGTTATTACTTAAAGCTTTTGAGAAAACAAAATCCCAACCTCTTGTTTAGACTTTGAGATTGGTGAAGGTTCTTAGAAAGTT
CCAGTGTTGATGGCATCGGCATTAGCATCTCCGAGAGCTGCCTCTTTAAGATAGGTTTCAGCCAACTGGACTCTCTTGACATTCTCTTGCTCTTGAACAA
GCATGTTACCATACCCAAGGAGCTTCTCAAGGGTCATTTTTGGTTGCTCAAAAGTTGGGGGTCCATCTCTAGAGTTCAAAAGTTTGTCACCAATTTGTTC
AATTCCAGTTCCTGAAACCCATTTCCTCACTTCATCGAGTCTCTTGACA