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Detailed information on CNT3096920


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30200107Solanum tuberosumPisum sativum74.56100.5682.72891forward
CNT30608559Solanum tuberosumGossypium raimondii88.126981.21053forward
CNT30716337Solanum tuberosumMalus domestica golden88.785.5584.431060forward
CNT30704854Solanum tuberosumPrunus avium88.3759.2384.941056forward

Expression of CNT3096920

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSRVIVLPVKVFTKICIPPRRRRTK*

>peptide 2 (31 aa)
MVSELSTSSVIVLPVKVFTKICIPPRRRRTK*

>peptide 3 (37 aa)
MVSELSTSRVIVFPVRVLTKICIPPRRRSTKWRVDSF*

>peptide 4 (29 aa)
MSFHLPTAYQQKSTFAGLEGCPLCPESWP*

Sequence

>CNT3096920
AAAAGAGAAACATGAAAGTTTATGATCTGTTGGGAAACATCACAGGATCACAAAAGGAAACAAACTAGTTCATGAACAAAACACTGCTGCAAACTGACCA
AAGACACAGGCACTACCATTGACAACAGACCCCTCTAAAAACCACCACGGAGACGGAGGACAAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGC
CAAAGTCCTACCATCTTCGAGCTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCA
ATAGTATCAGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGTCAAGGTCTTGACAAAAATCTGCATACCTCCCCTGAGTCTCAACACAAGATGAAGGG
TCGATTCCTTCTGAATATTGTAATCGGCTAATGTCCTTCCATCTTCCAACTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGAGGGATGCCCTCTTT
GTCCTGAATCTTGGCCTTAACATTGTCGATGGTGTCGGAGCTCTCAACCTCAAGTGTAATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATCCCA
CCACGGAGACGCAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAACC
TCTGCTGGTCTGGTGGAATACCTTCTTTGTCCTGAATTTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCCACCTCAAGGGTAATAGTCTTGCCAGT
CAAGGTCTTCACAAAGATTTGCATCCCACCGCGAAGACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCCATCC
TCAAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTAACCCTTAACGTTGTCAATGGTGTCT
GAGCTTTCCACCTCGAGGGTGATTGTCTTTCCAGTGAGGGTTTTGACAAAGATCTGCATCCCACCACGAAGACGGAGCACCAAGTGGAGAGTTGACTCCT
TCTGAATATTGTAATCGGCTAGAGTACGGCCGTCTTCAAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCC