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Detailed information on CNT3096790


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 4e-175

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30701196Solanum tuberosumQuercus lobata73.0574.6385.37656forward
CNT3019912Solanum tuberosumCitrullus lanatus87.5347.0485.75786forward
CNT3069547Solanum tuberosumQuercus suber73.0594.9384.45656forward
CNT30488054Solanum tuberosumOlea europaea73.0576.3784.3656forward
CNT30153579Solanum tuberosumPrunus persica71.7140.6685.25644forward
CNT30643414Solanum tuberosumCannabis sativa89.276.1483.52801forward
CNT30120072Solanum tuberosumCitrus clementina87.8667.8484.41789forward

Expression of CNT3096790

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVSELSTSKVMVFPVKVFTKICIPPRRRRTK*

>peptide 2 (31 aa)
MVSELSTSRVIVLPVKVFTKICIPPRRRRTK*

>peptide 3 (36 aa)
VNRLVHERNIATNRPKTPTATDSIKNHHRIGGQGAE*

>peptide 4 (44 aa)
MPSLSWILALTLSIVSELSTSRVMVFPVKVFTKICIPPRRRSTK*

Sequence

>CNT3096790
AAGTAAACAGACTAGTTCATGAACGAAACATAGCAACAAACAGACCCAAGACACCAACAGCAACAGACTCCATCAAAAACCACCACAGAATCGGAGGACA
AGGTGCAGAGTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCAAGCTGCTTCCCTGCAAAGATCAGCCTCTGCTGGTCCGGTGGGA
TTCCCTCCTTGTCCTGAATCTTAGCCTTCACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGTCAAGGTCTTCACGAAGAT
TTGCATCCCACCACGGAGACGCAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCCGTCCTCAAGCTGCTTTCCGGCA
AAGATCAACCTCTGCTGGTCTGGTGGAATACCTTCTTTGTCCTGAATTTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCCACCTCAAGGGTAATAG
TCTTGCCAGTCAAGGTCTTCACAAAGATTTGCATCCCACCGCGAAGACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGT
CCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTTGGCTTTAACGTTGTCAATAGTG
TCGGAGCTTTCAACCTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAAATTTGCATTCCACCACGAAGACGGAGCACCAAGTGAAGGGTTGATT
CCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATCGGCCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCC