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Detailed information on CNT3096706


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CH05|UBI2P_PETCR, E-value = 3e-144

BLAST vs NONCODE:
NONSTUT000620, E-value = 2e-158

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547448Solanum tuberosumIpomoea triloba43.4264.7987.53449forward

Expression of CNT3096706

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVSELSTSRVIVFPVRVLTKICIPPRRRSTKWRVDSF*

>peptide 2 (31 aa)
MVSELSTSRVIVLPVKVFTKICIPPRRRRTK*

>peptide 3 (29 aa)
MSFHLPIACQQKSTFADLVGYPLCPESLP*

Sequence

>CNT3096706
GCAAACATAGGATAAATCCAACATTTTTAACATCAAAATGTTGACATTATTATTCACTAAAAGAGAAACATGAAAGTTTATGATCTGTTGGGAAACATCA
CAGGATCACAAAAGGAAACAAACTAGTTCATGAACAAAACACTGCTGCAAACTGACCAAAGACACAGGCACTACCATTGACAACAGACCCCTCTAAAAAC
CACCACGGAGACGGAGGACAAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCAGCCAAAGTCCTACCATCTTCGAGCTGCTTCCCTGCAAAGATCAG
CCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCCTGAATCTTGGCCTTCACGTTGTCAATAGTATCAGAACTCTCCACCTCCAAAGTGATGGTTTTCCCA
GTCAAGGTCTTCACAAAAATCTGCATACCTCCCCTGAGCCTCAACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCGGCTAATGTCCTTCCAT
CTTCCAATTGCTTGCCAGCAAAAATCAACCTTTGCTGATCTGGTGGGATACCCTCTTTGTCCTGAATCTTTGCCTTAACGTTGTCAATGGTGTCGGAGCT
TTCCACCTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATCCCACCACGGAGACGCAGGACCAAGTGAAGGGTTGACTCCTTCTGG
ATGTTGTAATCAGCAAGGGTCCGGCCGTCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCTTCTTTGTCCTGAATTTTGC
CTTAACGTTGTCAATGGTGTCTGAGCTTTCCACCTCGAGGGTGATTGTCTTTCCAGTGAGGGTTTTGACAAAGATCTGCATCCCACCACGAAGACGGAGC
ACCAAGTGGAGAGTTGACTCCTTCTGAATATTGTAATCGGCTAGAGTACGGCCGTCTTCAAGCTGCTTGCCTGCAAAGATCAGCCTCTGCTGGTCCGGGG
GAATGCCTTCCTTGTCCTGGATCTTGGCTTTAAC