Detailed information on CNT3096636


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONMEST004538, E-value = 3e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30518402Solanum tuberosumJuglans regia5.5431.5988.43121forward
CNT30608772Solanum tuberosumGossypium raimondii5.4938.2285.83120forward

Expression of CNT3096636

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MVKLKTTLTYLKDTKITELFNGESICSLLFSVCLQPINSSLNVSSTFRFLSDDLLRKFSPTQTYKYH*

>peptide 2 (36 aa)
MKNILKRKKYSLCSSLLIHYILPITCNKSRKDNCIF*

>peptide 3 (33 aa)
MTCSGNSLQLKHTNTTDTEHPAQSAAASSLSQP*

>peptide 4 (33 aa)
MTCSGNSLQLKHTNTTDTEHPAQSAAASSLSQP*

>peptide 5 (29 aa)
MLSHMNQFIGYFSPYICLLLLFFTKDHRTH

>peptide 6 (31 aa)
MKQCKINQIWFDTLVLILLLLLVNQKVIFHT*

>peptide 7 (30 aa)
MTFILKQKNNKFSIVSLSPKSCIKISRGKA*

Sequence

>CNT3096636
ATGAAAAATATATTAAAACGAAAGAAGTACTCCTTATGTTCATCTTTACTTATTCACTATATTTTACCTATTACTTGTAATAAATCAAGAAAAGATAATT
GTATATTTTAAAAATATATTTTACTCCTAACATTAATTATTTATCACCAAATCAATTTTAAGAAGTAATACAAAATATTAATCAATAGGATAATGTAGTA
AAATAATCATGTTAATTATTAAGATATGAAGCAATGTAAAATAAATCAAATTTGGTTTGATACCCTGGTACTAATTCTTCTTCTGCTTCTGGTAAATCAA
AAGGTAATCTTCCACACTTGACGAGAGAAGAAATTAGAAAAACGATAAATCTGATGGGTTGACACCACAAATTTTATCTCTAAAAATCATGTTTGACTGC
GCTTCACTATATTCTTAACATATATATTGAATTTAAATATAACAAATAAAAATAAATAAGAAGAATATCTTGTATTTTTTTTTGTGGATGTGAATTGAAT
TAAAATGACATTTATATTGAAACAGAAAAATAATAAATTTTCTATTGTTTCATTGTCACCCAAATCTTGTATCAAAATTAGTAGGGGAAAGGCTTAAAAT
AGTCCATTATCTTTGAGTTTAGACTCAAAATAGTCCTATTTCTCTTTAGTGGAGCATTAATAGTCATGATTCTTTAATAAAGTGGTGCATTTTCAGTCTC
CAATCTTAACCACAGTTAGTTTTTTAATAGACCAGTGGGTTATGCACGTGACCTGAATTTAAATCTGATAATTAATTGGGTTTTCTTCATTTCTTTCTTA
TATTTGTTCATTTAATCCAACTTCTTTACCTGAGAAACTCCTTTACTGTTCTTCGGTCCCTTTTACTTCCTATTTCTAGTTTTTGTTCCTTTCTGTAATT
TGGGGCTTCTGGCAATTTTGAAGGAAAATAAGAATTGCATAGACTATATTTTGGTTCATTAGTTTTCCTTGCTGAATAAACGAAAGTAAAGGAAAGAAGG
GTAACCGAGAGCCTACTTATTCTATAAAGTTTCATAATTTTTTGAGAAAAAATATATATTTTCAATTCACCTAGATTGATTTCAGATTTTAGTTTTCACT
TGTATTAGCACCTTCTGAATGAATGGTTAAGTTGAAGACGACACTAACATACTTGAAAGATACAAAGATAACTGAACTCTTCAATGGCGAATCCATCTGT
TCTTTACTGTTTTCGGTTTGTCTGCAGCCTATAAATTCCTCTCTGAACGTTTCTTCAACATTTCGCTTTCTGTCGGATGACCTGCTCAGGAAATTCTCTC
CAACTCAAACATACAAATACCACTGATACAGAACACCCTGCACAGTCTGCAGCAGCCTCTTCGTTATCCCAACCTTAGAGGGATTCTTTCAACTGTTGAC
GCACACTGTATATAGGAGCTACCCAGTCGACAACATTCCCAGGCATCCCTCACTTGCTCACAGGAGATTGCCCACAGCTAAAACATAGAAATAACGCTGA
TACAGAACAGTGTGCAGGCTGTGCATCTGACTCTTCATTATGACCACCTTAGAGGGATTGCTTCCACTCCTCACGCAAACCGTATATACCGGCTAGCCAG
TCCACAAGATTGACACACATCCCACACGTTCTCACAGCAGCATCTTCATTACCGTCACCTTAGAGCGATTGCTTCAACTGCCAACACAAATCGTATATAC
AGCCTGTGTTCTTGGCTCTTTTCTGTTTGTCTACATCTCTCTCAAGCTTTGGTGAAGGTTTCTGTTTATCTCCGACGAACTGCGCAGACTTTAAATCTGT
CGCTGAAGCTTTGCTGAAGATTTCTGTTTCTCTCCTACGAGCTGCGCAGCCTATAAATTCCTCTCTGAACGTTTCTTCAACATTTCGCTTTCTGTCGGAT
GACCTGCTCAGGAAATTCTCTCCAACTCAAACATACAAATACCACTGATACAGAACACCCTGCACAGTCTGCAGCAGCCTCTTCGTTATCCCAACCTTAG
AGGGATTCTTTCAACTGTTGACGCACACTGTATATAGGAGCTACCCAGTCGACAACATTCCCAGGCATCCCTCACTTGCTCACAGGTACCTTATATGCTT
TCTCACATGAACCAATTTATTGGATATTTTTCTCCATATATTTGTTTATTACTCCTATTTTTCACAAAGGATCATAGAACTCACC