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Detailed information on CNT3096581


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43163|CHSB_SOLTU, E-value = 1e-157

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30628839Solanum tuberosumVigna unguiculata27.6245.3879.46516forward
CNT30195450Solanum tuberosumPisum sativum22.3835.8880.38418forward
CNT3045136Solanum tuberosumPrunus dulcis20.2960.9384.17379forward
CNT30156272Solanum tuberosumPistacia vera23.2328.1579.72434forward
CNT30564019Solanum tuberosumActinidia chinensis14.6136.8482.78273forward
CNT3087878Solanum tuberosumVigna radiata23.3927.9679.18437forward
CNT30171320Solanum tuberosumTrifolium pratense17.2475.2378.26322forward
CNT30143557Solanum tuberosumMedicago truncatula12.7422.7380.67238forward
CNT3074040Solanum tuberosumBrassica juncea6.5327.683.61122forward
CNT30610059Solanum tuberosumGossypium raimondii25.4369.5580.63475forward
CNT30647274Solanum tuberosumRosa chinensis18.920.381.87353forward
CNT30681726Solanum tuberosumTriticum urartu4.0130.2485.3375forward
CNT30151821Solanum tuberosumPrunus persica23.1875.1781.99433forward
CNT30645210Solanum tuberosumCannabis sativa14.6136.0683.52273forward
CNT3022855Solanum tuberosumPopulus trichocarpa24.5266.0979.04458forward
CNT30114123Solanum tuberosumFicus carica22.5926.2681.04422forward

Expression of CNT3096581

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MSYLGFGLAPFFYGLLGCLFAKFRHFNNNYVLPCIKGRRHVCTHVRVLFQDFLC*

>peptide 2 (77 aa)
MAFWAASLPSLGTSTTTMSCLASREGAMYAHMLGFSFKISSVKCIYLFLIIDLSPGNIQKKKKKKKKKKKKKKKKKN*

>peptide 3 (33 aa)
MCCIQLIKEKATWDIVNITKSISHVMLFKELTN*

Sequence

>CNT3096581
CAAATTGTAGAGGCCCATAGTATAAGCCCAGCCCACTAAGTAGCAACACTGTGAAGAACAACAGTCTAAATTGTAAGCCCAGGCCCAAATCCAAAAAGGA
CACCCCATTCAAGCCCTTCACCAGTAGTTCCTAGGCCTTCTTTTGTAGAGGCCTTTCTCATTTCATCCAAAATAAACAACACACAAGCACTTGACATATT
GCCATAGTTACTCAATACTTCTCTTGAAACCCTAAGTTTCTCAGGCTTTAGGCCCAATTTTAATTCAACTTGGTCCAACATCGCAGGCCCACAATATAAG
CCCAACCCACTAAGTAGCAACACTGTGAAGAACAACAGTCTCAACTGTAAGCCCAGGCCCAAATCCAAAAAGGACACCCCATTCAAGCCCTTCACCTGTA
GTTCCTAGGCCTTCTTTTGTAGAGGCCTTTCTCATTTCATCCAAAATAAACAACACACAAGCACTTGACATATTGCCATAGTTACTCAATACTTCTCTTG
TAGCCCTAAGTTTCTCTTGCTTTAGGCCCAACTTTAATTCAACTTGGTCCAAAATCGCAGGCCCACCCGGGTGAGCGATCCAAAATAGAGAGTTCCAGTC
AGATATACCTAGAGTAAGTGGAACGTAAGCCCAACCTCACGGAGATGTCCATCGATAGCACCTTCGCTATCGGGGACAAGAGTTTGAGCTGCTGAGACGA
GTTCGAATAAAGGCCTTTCAACCCCTATAATTGGGTCCGAACCCATAATGATAGCGGCCGCCCCATCACCAAAAAGGGCTTGGCCTACCAGGCTATCTAA
GTGAGATTCACTGGGTCCACGGAATGTGACTGCAGTGATCTCAGAGCAAACAACAAGGACTCTAGCGCCCTTGTTGTTCTCAGCCAAGTCCTTGGCTAGC
CGGAGAACTGTTCCCCCGGCAAAGCAACCTTGTTGGTACATCATGAGTCGCTTGACTGATGGGCGAAGCCCGAGGAGCTTAGCGAGTTGGTAGTCGCACC
CGGGCATGTCCACACCACTAGTTGTACAAAAGACCAAATGAGTTATCTTGGATTTGGGCTGGCCCCATTCTTTTATGGCCTTTTGGGCTGCCTCTTTGCC
AAGTTTAGGCACTTCAACAACAACTATGTCTTGCCTTGCATCAAGGGAAGGCGCCATGTATGCACACATGTTAGGGTTCTCTTTCAAGATTTCCTCTGTT
AAGTGCATATATCTCTTCTTAATCATTGATTTATCACCTGGAAATATACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAACTAATGTCAAGAAATTAAACATAAAAAAGATATGAATTCCTAAATATTTGGACAATTATTTTTAATTTTTTTTATAATTGTTAAGCAAAATTAACA
TGTGTTGTATTCAACTTATTAAGGAAAAAGCAACATGGGATATAGTCAATATCACCAAAAGCATATCACATGTGATGCTATTTAAGGAATTAACCAACTG
ATTAATACTACATCATTATTATAAGATGAAAAAGAGAGAATTAATTATTAGATGAATATTATGTAAAGTCACCTCTAATTATCAAAATTCAATTAAATTA
ATAGAGTTTCAACCATTAATCTACAACTCCAACATACATTACTATTCATATGAAATTCATATTTTTAGGTGAATTCAGGCATAATAAGTTCTTCAAAATA
AACTTTATGTGTTAGGAAACTACGTAAAAAGTATTAATTTCAGCAGGTTAATATAATTAAAACATTCCAAAAAAATCATAGTCAATGAAAAGCTATTCGA
CCCCACAAGATTAACATAAAATTTAACAAAACAAGTAAAAACAATAAGGTACTATAGGGGGTTTATAT