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Detailed information on CNT3096457


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316252Solanum tuberosumCorylus avellana23.6120.3490.2872reverse complement
CNT30544156Solanum tuberosumBrassica napus20.6620.7988.8963forward
CNT30235645Solanum tuberosumBrassica oleracea2019.8788.5261forward
CNT30510959Solanum tuberosumSolanum lycopersicum10010091.15305forward
CNT3061108Solanum tuberosumArabidopsis lyrata17.3823.1490.5753reverse complement
CNT30261535Solanum tuberosumBrassica rapa20.6620.7288.8963forward
CNT30612441Solanum tuberosumArabis alpina28.5228.2585.0687reverse complement
CNT30644641Solanum tuberosumCannabis sativa23.2819.0991.5571forward
CNT3030049Solanum tuberosumTheobroma cacao23.6123.4588.8972forward
CNT3058191Solanum tuberosumAmborella trichopoda23.9323.7886.373forward

Expression of CNT3096457

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MWWNIGLFQKGWAWWAYIWPALSKYRVGPCGPIEGMGCWALKVEQTA*

>peptide 2 (55 aa)
PSSVTLACNPTGGNNVVEYWAIPERLGLVGLYLACPVQVQSWALWSNRRNGLLGS*

Sequence

>CNT3096457
GCCGAGCTCAGTAACTTTGGCTTGTAACCCAACTGGGGGCAATAATGTGGTGGAATATTGGGCTATTCCAGAAAGGTTGGGCCTGGTGGGCTTATATCTG
GCCTGCCCTGTCCAAGTACAGAGTTGGGCCTTGTGGTCCAATCGAAGGAATGGGCTGCTGGGCTCTTAAAGTGGAGCAGACTGCGTGAGGCTGGTTTCAC
AGAGCAACGAATAGTTTCCGCTCTGTGCAGTGGAAGGATAACGGGCCGGTGCCGGCCAAACCCAACAAAAGCCTGATGGGTTGCTTCGATTAAACCACCA
TTTTT