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Detailed information on CNT3096002


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30510947Solanum tuberosumSolanum lycopersicum52.1237.3893.36271forward

Expression of CNT3096002

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MQIKHLDSSKADIARKMNKQFTMDFICFFKAWFPYLVT*

>peptide 2 (97 aa)
NFYKVITIYKSFEISMKKIQHMIYLEKSASYLLLISSAEDSEAVSSNVEVEAVSTELLSLSEDPKLWSSDGCFKCQYIILAVRANSNANKASGLIKS*

Sequence

>CNT3096002
ATAATTTCTACAAAGTGATAACAATCTATAAATCTTTTGAAATTTCAATGAAAAAAATTCAGCACATGATATATCTGGAAAAATCAGCCAGTTATCTGTT
ACTGATATCATCCGCTGAAGACTCCGAAGCTGTATCATCCAACGTTGAGGTTGAGGCTGTGTCCACAGAGCTACTATCACTATCTGAAGATCCAAAACTT
TGGTCTTCCGACGGTTGTTTCAAGTGCCAATACATTATACTTGCTGTCAGGGCCAACAGTAATGCAAATAAAGCATCTGGACTCATCAAAAGCTGATATC
GCAAGGAAAATGAATAAACAATTTACTATGGACTTTATTTGTTTCTTCAAAGCTTGGTTCCCATATTTAGTCACCTGATTCCATGGGTAAGCAGTAACAC
TTGCATAGCTTGTTGACATGATGCTTAGACCAGTATAAAGTTTTTACCTGTACTAGGAACTGATCTTTACCTAGCTTGATTGTAGTTGAAAGAGACAATG
TTTAATGACTTCTATGCAAA