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Detailed information on CNT3095993


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2MIK2|ATPA_SOLBU, E-value = 5e-139

BLAST vs NONCODE:
NONCQUT006914, E-value = 1e-119

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696665Solanum tuberosumOryza sativa22.5915.9883.52904forward
CNT30521912Solanum tuberosumSetaria italica1.922.0988.1676reverse complement
CNT30535895Solanum tuberosumEucalyptus grandis10.8478.3484.56434forward
CNT30703171Solanum tuberosumQuercus lobata33.8811.3887.761356forward
CNT30617713Solanum tuberosumSesamum indicum15.5431.7389.07622forward
CNT30271983Solanum tuberosumChenopodium quinoa10.7936.9287.73432forward
CNT30730672Solanum tuberosumCorchorus capsularis5.0220.0889.05201forward
CNT30201764Solanum tuberosumPisum sativum18.1796.887.35727forward
CNT30505351Solanum tuberosumNicotiana attenuata26.3430.3296.391054forward
CNT30710758Solanum tuberosumGlycine max566.8989.5200forward
CNT30160646Solanum tuberosumPistacia vera1.7730.7487.3271reverse complement
CNT30179302Solanum tuberosumSecale cereale531.0688.5200forward
CNT30301052Solanum tuberosumTriticum aestivum21.5934.9483.91864forward
CNT30220359Solanum tuberosumHordeum vulgare15.8260.5782.78633forward
CNT30567675Solanum tuberosumActinidia chinensis7.3232.3883.62293forward
CNT3086153Solanum tuberosumVigna radiata4.3278.2884.39173reverse complement
CNT30541477Solanum tuberosumBrassica napus5.220.4587.02208forward
CNT30511193Solanum tuberosumSolanum lycopersicum30.3668.5791.771215forward
CNT30554216Solanum tuberosumOryza glaberrima8.753.3783.62348forward
CNT30172743Solanum tuberosumTrifolium pratense1.4227.5489.4757reverse complement
CNT30660677Solanum tuberosumTriticum dicoccoides9.3528.0483.42374forward
CNT30598585Solanum tuberosumFraxinus excelsior8.8741.6290.99355forward
CNT3018020Solanum tuberosumZea mays22.5921.9683.74904forward
CNT30605785Solanum tuberosumGossypium raimondii7.1525.8484.27286forward
CNT30205079Solanum tuberosumHelianthus annuus9.6253.2586.75385forward
CNT30126536Solanum tuberosumCorymbia citriodora3.327.9783.33132forward
CNT30627896Solanum tuberosumDaucus carota9.225.0988.04368forward
CNT30353938Solanum tuberosumEragrostis tef9.1562.9983.33366forward
CNT30364932Solanum tuberosumSorghum bicolor6.8741.685.45275forward
CNT30621081Solanum tuberosumCajanus cajan8.8233.8186.97353forward
CNT30371010Solanum tuberosumOryza glumipatula19.5985.7881.63784forward
CNT30409854Solanum tuberosumPapaver somniferum10.3262.2986.2413forward
CNT3058165Solanum tuberosumAmborella trichopoda2.437.9488.5496reverse complement
CNT30121210Solanum tuberosumCitrus clementina33.8834.8187.611356forward
CNT30149007Solanum tuberosumBrachypodium distachyon3.0237.1285.95121reverse complement
CNT30103672Solanum tuberosumOryza rufipogon6.8531.3986.5274forward
CNT30551824Solanum tuberosumOryza brachyantha2.8246.3187.61113forward

Expression of CNT3095993

Peptides detected in this lncRNA

>peptide 1 (35 aa)
PNKKHFLDKLHDRTVFVIEKTFGDKFALVWRDHHK*

>peptide 2 (36 aa)
MPILALMVCKCNLLFKQLFKVPKASRKACWKTRCRT*

>peptide 3 (35 aa)
MNLYISNSRDHAPLFPTYNEKGYIWLVQPILEINN*

>peptide 4 (67 aa)
MKVDYFSIPFQNSIIPSRTKHESFDSFGSHAQLLKVNSHIFFYECNEPIFSSLFIFQKDIETNVRPK*

>peptide 5 (45 aa)
MSFFHNVNQAFILDSILFENQASKHLEGFAYSYSSTDTSRPFLKY*

>peptide 6 (42 aa)
MLCLDFKQFVLTMLIVPHYWLIVNQNQFTNESQNAMVLTYNL*

Sequence

>CNT3095993
ATCCAAATAAAAAACATTTCCTTGATAAGCTTCATGACCGGACGGTCTTCGTAATAGAAAAGACATTTGGCGATAAGTTTGCGCTTGTTTGGAGAGATCA
TCATAAATGATTAAAGTGTGTCGTTCACGATACATCAAATATTCAGCCAGAGCTGCTCCTGTATAAGGAGCAAGGTATTGTAATGTAGCAGGGGAATCTG
CCATTTCAGCTACCACAATAGTGTATTCCATCGCTCCCCTTTCCTGTAAAGTAGTTACTACCTGGGCCACATAAGACACTTTTTGCCCAATAGCTACATA
AACACATATTACATTTTGACCTTGTTGATTGAGAATCGTAGTTGTGGCTACTGCTGTTTTACCGGTCTGTCTGTCCCCAATAATTAATTCTCGTTGACCA
CGTCCTATAGGGATCATCGAATCAATAACAATAAGTCTGGTTTGAAGAGGCTCATATACGGAACATCGTGAAATAATACCGGGGGCGGCAAATTCAATTA
ATCGAAATTCAGAAGTTGAAATTTCACCTCTACCATCAATAGGTTTAGCCAGGGCATTTACAACACGACCCAAATAAGCCTCACTCACGGGTATCTAAGC
AATTCTTCTCGTTGCTTTTACAGAACTTCCTTCTTGTATCCACAAACCGTCGCCATTAATACAACACCAACATTATTTGATTCCAAATTCAGAGAAATGC
CTATTGTACCCTCTTCAAATTCTACTAATTCACCCGCCATTACTTCATCAAGACGGTGAATACGAGCAATGCCATCGCCTACTTGAAGTACGGTACCGAT
ATTTACAATCTTTGCTTCTCTATTATATTGTTCAATACGTTCACGAATAATATTACTAATTTCGTCAGCTCGAATGGTTACCATGATTCTTTCTTTATTC
TTTTTTGAAAGAAAAAAATAATACTTACCTTAGAAAGACTAATAAGTTATTTCTTTCATTGTTCCCAACATGCCAATATTGGCACTAATGGTGTGTAAAT
GTAACTTGTTGTTCAAACAACTATTCAAAGTTCCTAAAGCTTCTCGTAAGGCTTGTTGGAAAACCCGTTGTCGGACTTGATTAATCGCCCTTTGCTGTTC
AAACTGAATCGTTTCGTTTTTGTAATTTTCTAATTGTTCCAAAGTTTTATAAGTTGAATTAATCAAATTCAATTTTTCTCGTTCTATCTCGGAGTATCCA
TTCACTCAAAACTGCTCGGCTTCGGTTTCTACTTTCCATAAACGAGAATGAGCTTTTTCGAGTTGTTCAATAGCCCCTCTGCGCAGTTCTTCTGAATTTC
GAATAGTATTCAAGATCCTCTGTTTTTGATTATCTAATAAATCACTTAATGAAAGTAGATTATTTTTCCATTCCTTTCCAAAATTCCATAATCCCTTCCC
GAACCAAACATGAATCTTTCGATTCATTTGGCTCTCACGCTCAATTACTTAAGGTAAATTCTCATATCTTTTTTTATGAATGTAATGAGCCTATCTTCTC
TTCTTTGTTCATATTCCAAAAAGATATCGAAACTAATGTAAGACCAAAATAGTCGGAGGACTCTTCTGACAAACTCCAAAATATGTAATTGTCAGCAAAG
TTTTTTTTTTTTTCTAAATCCAAAAAAGTCCTTCTTACTTAGAATAGGTCGTCGATTCAGCATTAGATAAAGGGGGTAAAATCCCTATTTTTTCAATTTA
CAATAAGCAGTTAAAATCATTTTATCAATATGAGTATCCTATATCGATAAAATATTTATTTTGAAACCACCTCTATATTAACATAGTGGTAGAAAGAGTA
CCATGCTGTGTCTAGACTTCAAACAATTTGTTTTAACCATGTTAATAGTTCCACATTATTGGTTAATAGTGAATCAAAATCAATTTACCAATGAATCGCA
AAATGCTATGGTTCTTACATATAATTTATGAATTTATACATAAGTAATTCGCGAGATCATGCACCTCTCTTTCCTACTTATAACGAAAAAGGGTACATTT
GGTTGGTCCAACCTATTCTTGAAATAAACAATTAGCACACACTCCCTTTCCAAAAAAAAAATCAATACGCCAAGCACTACACTTAGATTTATTGGATTTG
TTGCTAAAATATCGGTATTAAACCCGAAACTCCCGGCAGATGGTCAGTGGCCCAAAGAAACGAAAGAATCGGTTACGTTTTTCATATGATCTCCTCTTAT
AGATAGACTAAAAAATCGAACAGAGTTCTTTTTGTAGCACTTCGCCCCTCTTTTTATTTATTCTTTTATTTTTTCTGAAATTGAGTAAAAAAATAAAAAA
TATTCGAGTTAGTTAGAAATTATGAACTAATGAACTAGCCCTTTTATTGGTTATTGGAACACTAACACTTACTAAAAAGAGTTTCCCTTGGTCTATGAAC
GGGAAGGATGAAAGCGAGTCAGTAGGCTAATTCCTCATCCGCAAATCAGCCCTTCCCGTAGGTTCTTTTCTCAAAGAATAAAGAATGGGAGGAGGGAAAT
CTTGATAGAATTTGAAAAAGCAAACGACAAGTCGAAGGCAATAAAATATGAAAAATAAATATATTTTTCATATTTCTAAGCTAAGATTAAACAAAAGGAT
TTGCAAATAAAAGTGCTAATGCTACAACCAGTCCATAAATTGTTAAAGCTTCCATAAAAGCTAGACTAAGCAATAGCGTACCTCGTATTTTTCCCTCTGC
CTCAGGCTGTCTCGCGATACCCTCTACAGCTTGACCCGCAGCTAACTCTTCACCAACTCCAGGTCAAATAGAAGCAAGCCCTACGGCCAATCCAGCAGCA
ATAACGGAAGCGGCATAAATCAGTGGATTCATGATAAGGTCCTCGTACCAAAAAAAGAAATGGTTAATGATACAATCAACCAATGAATTATGACTTAATT
ATTCCCTCACTAGGACTCATCCAATTGAAGTAACTAAGAACTTCGGATTGAAGTAATAAGATTATTGAATCATCAAAACAACTTCGATATATCTTTTTTA
CTTTTTAGCCACAGAGTCTTTGTGAATCCATACGACTTTCGTTCTTCCATTTCTTGTTCTTGGTTCGAACTATTAGTTGAATTATTTATCGATTTCATCT
GTTTATTCATTTAATTCACAGTCACAAGGGGCCGGAAGGACTTCTAGTCTATTAGAATCCCCTAGAGTAGTAAAATATATCTTTAGTTCATTTGATATAT
AACTAGCACTAGGCAATATCTAATATCACATATACATGTCTTTCTTCCATAACGTAAACCAAGCATTCATCTTAGATTCAATCCTATTTGAGAATCAAGC
GTCGAAACATCTAGAAGGGTTCGCTTATAGTTATTCAAGTACAGATACCTCCCGCCCCTTTCTAAAATACTAAAAAAAAATTAAAAATTCTTTTGAATCT
TACCTTTTCTTATTATTCCACCTAGAGGAATCTAAATGGACAAATTTTCATGGACAGCTAATTTCATAGGTATAGAAATATCATTATTTGATTGATCTAA
GTTCATGCAATTTATTAATAAAATTAGATAAAAAAATATTCATTTTTATTATTTATTTATTATTAATATTTTGGTCAATCGTTGAATAAAATCAATTGAA
AGGGAAATCATTTCGCCCTTTTTTTAAATTTAATTACACGTCGTATACCTATACAACAAGAACTATTGACAAAAATTCTTATATTCAAATTGTTTTAACA
ATGAATTAATAATGAGATGGACTAAGCAATCTAAAGTGAATATTCATTGAAACGAAGTATGTTATTAAGTGAAGGAATGGGGAATTTTAAGAAAAGGATC
TTTGTTTTTAGATCTTTTTCCCCTTACTCTTTAATATCATCGTAATGTTTTTGCTATCAATCTAGATAGTATATAGCATAGTTGTATATTTAGATTCCCC
TATTCTATTCCGTAAGTTAAGTAATTCTCTTGAGCCACCCACCATATACATTTATACATTGCTGTGGGCTAAGCTAAAAAAGCTATTTCAATGATGGCCC
TC