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Detailed information on CNT3095573


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692810Solanum tuberosumOryza sativa22.037.0487.6489forward
CNT30378678Solanum tuberosumArabidopsis thaliana22.037.4788.7689forward
CNT3021612Solanum tuberosumCitrullus lanatus10.8921.6790.9144forward
CNT30300480Solanum tuberosumTriticum aestivum22.036.7988.7689forward
CNT30540528Solanum tuberosumBrassica napus22.037.4188.7689forward
CNT3018289Solanum tuberosumZea mays22.033.4389.8989forward
CNT30655381Solanum tuberosumRosa chinensis20.0515.1490.1281forward
CNT30627894Solanum tuberosumDaucus carota22.038.7391.0189forward
CNT30684652Solanum tuberosumTriticum urartu22.0311.5188.7689forward
CNT30360309Solanum tuberosumLactuca sativa22.0315.4892.1389forward
CNT30147990Solanum tuberosumBrachypodium distachyon22.035.8887.6489forward

Expression of CNT3095573

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MSPLLRNFDPNVNFVDMDIKDCAEKKKQL*

Sequence

>CNT3095573
CTTGATTTATCAATAAAAATTGTGGTAGAGTAACAAATATTCTATCTCAAATTCGAACCCTTTCTGAGTATGTCACCTTTGTTACGAAACTTTGACCCAA
ATGTCAATTTCGTCGACATGGATATCAAAGATTGTGCTGAAAAAAAGAAGCAGCTTTGATGGATAATATGATAATCTTCAATCCACTGAGAATTGGATAG
CTACTATGGCATGATATGTTGTCTCTTTCAGCACACAGTAGTTTTTGTTCGGATCCTACCATGCCAAGGCCCACAGTTATGTAGGTGATATTATGAGATC
AAGTTGCAACAATAGCTGAATATGCAACAACAATCCAAGGTCGCATATCCAGACGCGAACTAAGCTCCCACTCACGACCCATGTAACAGGCTATGGCAAG
TAAG