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Detailed information on CNT3095535


BLAST search results

BLAST vs Swiss-Prot:
sp|Q08298|RD22_ARATH, E-value = 5e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30515780Solanum tuberosumJuglans regia32.1416.1682.91117forward
CNT30500761Solanum tuberosumCoffea canephora20.3321.9686.4974forward
CNT30727307Solanum tuberosumCorchorus capsularis31.878.3881.03116forward
CNT30199626Solanum tuberosumPisum sativum41.4823.0982.12151forward

Expression of CNT3095535

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MIPCKTLLFLFCDNRILHRHSFVCDKLLICHYCCCFPFSWLLGLCIFAFVCFLFVSLLIMVALWLSLS*

>peptide 2 (32 aa)
PNNVILWKEMTNRDRSRCNLKNFESQMFWVPL*

Sequence

>CNT3095535
CCCAAACAATGTGATCTTGTGGAAGGAAATGACAAACAGGGACAGATCCAGGTGTAACCTTAAGAACTTTGAAAGCCAAATGTTTTGGGTTCCATTGTGA
TGTGTCTTTGTGACAAACAGCTACAGCCTTAACTTTTGTTCCATCAGCACCAACTAATGATACCATGTAAGACTCTGTTGTTTCTGTTTTGTGACAATAG
AATACTGCATAGGCATAGTTTTGTTTGTGACAAACTACTGATTTGTCATTATTGTTGTTGTTTCCCATTTTCTTGGCTCCTAGGATTGTGTATTTTTGCA
TTTGTGTGTTTTCTTTTTGTGTCTCTGTTGATAATGGTTGCACTTTGGTTATCGTTAAGTTGAT