Detailed information on CNT3095401


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 1e-110

BLAST vs NONCODE:
NONSTUT001352, E-value = 3e-55

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30404250Solanum tuberosumBeta vulgaris53.5950.8883.91522forward

Expression of CNT3095401

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MELHNIEDQIKIHIESPLIYNSLLYRAIKY*

>peptide 2 (76 aa)
MDQTWVSQVIKSTFTENLGSSFEPNSLTKLYTVTGQKLRKDTAKSSKHGPSTMDHLQLTVLGKISGSAESPAVSHP*

>peptide 3 (58 aa)
MGRSYHQDKVGQQLHQEAHQQYGNPQRLPSTQLDKPKWPRYFVHGPNLGFPSNQVHLH*

>peptide 4 (50 aa)
MAHLQWITSNSRFLAKFLDQLKVQQCPIRSHQETHQSSSLGLHQRMGPNT*

>peptide 5 (39 aa)
LNFFYMGLSTCIFLLINYFDRGFSLLFSFTHDDMRAYTT*

Sequence

>CNT3095401
TCTTAATTTTTTTTATATGGGCTTGAGCACTTGTATATTCTTATTAATCAACTATTTTGATAGGGGATTTTCTCTTCTTTTTTCCTTTACACATGATGAT
ATGAGAGCATACACAACATAGGCAGAAGATTATATTAATGATATAATGCAAACACATCTAACCTGAAAATTCAACCTCATAACACTATTGCAAAATGTAA
ATATAAAATAATATTATGGAACTACACAATATTGAAGATCAAATAAAAATTCATATAGAATCTCCACTAATTTACAATAGCTTGCTTTACAGGGCTATCA
AATACTAGAAGACTAGTCTATTTTAAGAACTTCACTTTCCGGGAACAAAGTTTGTGGCAAAAGCCCATGCGTTGTTGTTAACTGGATCAGCAAGGCCCAA
TGGGTCGAAGCTACCACCAGGATAAAGTGGGTCAACAACTTCACCAAGAGGCCCACCAGCAATACGGTAACCCTCAACGGCTCCCATCAACACAACTTGA
CAAGCCCAAATGGCCAAGATACTTTGTGCATGGACCAAACTTGGGTTTCCCAAGTAATCAAGTCCACCTTCACTGAAAATTTGGGATCCAGCTTTGAACC
AAACAGCCTCACCAAACTTTACACCGTTACGGGCCAAAAGCTCAGGAAAGACACAGCCAAGAGCTCCAAGCATGGCCCATCTACAATGGATCACCTCCAA
CTCACGGTTCTTGGCAAAATTTCTGGATCAGCTGAAAGTCCAGCAGTGTCCCATCCGTAGTCACCAGGAAACTCACCAGTCAAGTAGCTTGGGGCTTCAC
CAGAGAATGGGCCCAAATACTTGACACGGTCAGGACCATACCATGGACTACCAGAAGAGACAGGCTTGGCCTTGGTGGCAGTCTTCCTCATGGTGAATCT
TCCATTTCCGGTGATTTCAGAAGAAGACGGTGAGAGTTTTACTGCCTTTCCGGCAAATGTAGATGAAGAAAGAG