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Detailed information on CNT3095185


BLAST search results

BLAST vs Swiss-Prot:
sp|P36181|HSP80_SOLLC, E-value = 0.0

BLAST vs NONCODE:
NONSTUT001022, E-value = 1e-172

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30635894Solanum tuberosumCapsicum annuum10.0726.6495.33150forward
CNT30250974Solanum tuberosumAvena sativa7.1924.8888.79107forward
CNT30107297Solanum tuberosumOryza longistaminata8.829.1885.5131forward
CNT30149846Solanum tuberosumBrachypodium distachyon7.1924.1587.85107forward
CNT30584451Solanum tuberosumEchinochloa crusgalli11.1530.9781.33166forward

Expression of CNT3095185

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MNSECFLIRSLSLRSSRFSPDVSLVTVKEPPA*

>peptide 2 (36 aa)
QMQACRHQHLRFPHQCSNRVSASCEFCCQRCLAPQG*

>peptide 3 (35 aa)
MLFPIISQALVESSILFLCDLFWLPHPNGLLLVHQ*

>peptide 4 (44 aa)
MMEFSGLISMVFLLDIGPAILTSHQTAGRVHNTVRNNNLFNFVS*

>peptide 5 (39 aa)
LKCRHVGISISAFLINAQTEFQHPVNSVAKGVWLLKAET*

>peptide 6 (63 aa)
MGFCLFTSDHSLETSLTFFFFFSSFSLSSSTSSTFPSSSFFSSSSSSSEISFSMVFSTQREIG*

>peptide 7 (58 aa)
MINTRRTYSLILLGFFFVSKRSKGALFGTKRTALNSNWPSTEKCFTARCSSQSLVKLL*

Sequence

>CNT3095185
CTCAAATGCAGGCATGTCGGCATCAGCATCTCCGCTTTCCTCATCAATGCTCAAACCGAGTTTCAGCATCCTGTGAATTCTGTTGCCAAAGGTGTTTGGC
TCCTCAAGGCTGAAACCTGAGGTTAGAAGGGCAGTCTCAAAAAGCAAGAGAACCAAGTCCTTCACAGACTTGTCATTCTTGTCTGCATCAGCCCTCTTCC
TCAGCTCATCCATGATGGAGTTCTCTGGGTTGATCTCCATGGTCTTCTTGCTAGACATCGGTCCAGCCATACTCACCAGTCACCAAACAGCAGGGAGAGT
CCACAACACGGTCAGAAACAATAACCTTTTCAACTTTGTCTCCTAGCACATCCTTCATCACCTTACACAGTCCCTCAAACTTTTCCTTCAATTCTTCCTG
CTTTTTCTTCTCATCTTCACTCTCATCAAGCTTGAGGCCTTCCTTGGTAGCAGAAACAAGCTTTTTGCCCTCAAATTCCTTCAGCTGACCAATGGAGTAC
TCATCAATGGCATCAACCATGTAAAGTACCTCATATCCCTTCTTCTTCAGTTTCTCCAGGAAGGGAGAGTTCTCAACAGCCTTCTTGCTCTCACCAGTAA
TGTAGTAAATATCATTCTGGCCCTCCTTCATTCTGGTTACATAGTCTTTCAAGCTGGTCATCTCATCACCACTCTTGGTGGAATGGTACCTCAGCAGTTC
AGCAAACTTTGACCTGTCCTCAGAATCCACAATACCCTTCACAAAGCTCAAATATTCAGGAATCAACTCCTCACAGTTATCCATGATAAACACACGGCGA
ACATACAGCTTGATATTGTTGGGCTTCTTCTTTGTGTCAAAGAGGTCAAAAGGAGCCCTTTTTGGAACAAAAAGGACAGCCTTGAACTCCAACTGGCCCT
CAACAGAGAAGTGCTTCACAGCAAGATGCTCTTCCCAATCATTAGTCAAGCTCTTGTAGAAAGCAGCATACTCTTCCTTTGTGATCTCTTCTGGCTTCCT
CATCCAAATGGGCTTCTGCTTGTTCACCAGTGACCACTCATTAGAAACTTCCTTAACCTTCTTCTTTTTCTTCTCTTCCTTCTCCTTATCCTCATCGACC
TCCTCTACCTTTCCCTCCTCATCTTTCTTCTCCTCTTCCTCCTCATCATCAGAAATTTCCTTCTCTATGGTCTTCTCAACCCAAAGAGAGATAGGGTAGC
TAATGAACTCAGAGTGCTTCTTAATAAGGTCCTTGAGCCTACGTTCTTCAAGGTTCTCACCAGATGTATCCCTGGTAACAGTGAAAGAGCCACCGGCTTG
AGACTCCCAGACATACTGTTCATCATCATTGTGCTTTGTGGTCACAATAACCTTCTCAGCTACCAAGTAAGCAGAGTAGAAACCAACACCAAATTGACCA
ATCATGCTAACATCAGCACCAGCTGCAATAGCTTCCATGAACTCCTTGGTTCCTGACCTTGCAATTGTACCCAGGTTATTCACCAGATC