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Detailed information on CNT3094897


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30263944Solanum tuberosumBrassica rapa20.582.3392.9857reverse complement

Expression of CNT3094897

Peptides detected in this lncRNA

>peptide 1 (30 aa)
IEVGFGIWIFFVSMIWRIINDSFLDFLNDE*

>peptide 2 (48 aa)
MLIVILIRGKSTEYSTFLSLSNFYKKGTDVYIGKAVCNEKCKHGLGRDL

Sequence

>CNT3094897
ATAGAAGTCGGATTTGGTATTTGGATATTTTTTGTATCAATGATCTGGCGAATTATCAATGATTCATTCTTAGATTTTCTAAATGACGAATAAATGACGA
AGAGATCAAAAATTTTCACTATTCTGAAATGCTGATTGTAATACTAATAAGGGGTAAATCAACTGAGTATTCAACTTTTTTAAGTCTTTCTAATTTCTAT
AAGAAAGGAACTGATGTATACATAGGGAAAGCCGTGTGCAATGAAAAGTGCAAGCACGGCTTGGGGAGGGATCTTTA