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Detailed information on CNT3094880


BLAST search results

BLAST vs Swiss-Prot:
sp|P0CG85|UBI1P_NICSY, E-value = 2e-100

BLAST vs NONCODE:
NONMEST001181, E-value = 6e-115

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546134Solanum tuberosumIpomoea triloba73.5671.1185.76576forward

Expression of CNT3094880

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MQTHNHHNGQQTQPDNTTTNNRQLKNHHGDGGQGAEWTPSGYCSRQGCVHLQAAYQQRSTSAGLVGSPPCPES*

>peptide 2 (86 aa)
MGNRHSQTTRQPTTGNLKTTTETEDKVQSGLLLDIVVGKGASIFKLLTSKDQPLLVWWDPLLVLNLSFHIVDGVRTLHLQGDGLPG*

>peptide 3 (38 aa)
TQTAIRKETRNWMFIKTPLLFTNEKQKGTESENTLMIL*

>peptide 4 (31 aa)
MVSELSTSKVMVFPVKVFTKICIPPLSLSTK*

Sequence

>CNT3094880
ACTCAAACTGCGATCAGAAAAGAAACCAGAAATTGGATGTTCATAAAGACGCCATTATTATTCACAAATGAGAAACAGAAAGGAACAGAAAGCGAAAACA
CATTGATGATCCTTTAAGACCATAATGCAAACACATAACCACCACAATGGGCAACAGACACAGCCAGACAACACGACAACCAACAACAGGCAACTTAAAA
ACCACCACGGAGACGGAGGACAAGGTGCAGAGTGGACTCCTTCTGGATATTGTAGTCGGCAAGGGTGCGTCCATCTTCAAGCTGCTTACCAGCAAAGATC
AACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCGATGGTGTCAGAACTCTCCACCTCCAAGGTGATGGTCTTCC
CGGTTAAGGTCTTCACAAAGATCTGCATTCCTCCCCTCAGCCTCAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTGCGGCC
ATCCTCCAATTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTATCAATGGTGTCGGAG
CTTTCAACCTCCAAAGGTAATCGTCTTACCCGTAAGAGTCTTAACGAAGATCTGCATACCACCACGTAGACGGAGCACCAAATGGAGGGTAGACTCCTTC
TGGATGTTGTAATCAGCTAGAGTACGTCCGTCCTCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCCGGGGGAATTCC