Detailed information on CNT3094424


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671247Solanum tuberosumSetaria viridis39.15.9194.23104reverse complement
CNT30374577Solanum tuberosumArabidopsis thaliana21.4312.7594.7457reverse complement
CNT30226250Solanum tuberosumHordeum vulgare40.68.1993.52108reverse complement
CNT30627368Solanum tuberosumDaucus carota39.117.7897.12104reverse complement
CNT30687569Solanum tuberosumTriticum urartu40.65.3193.52108reverse complement

Expression of CNT3094424

Peptides detected in this lncRNA

>peptide 1 (51 aa)
LKYSKDSNIVNKEGGKTLAEFPNSIELGKLGSGQDLFRRKRSIPRIRVQLI*

Sequence

>CNT3094424
TCCTAAAGTACTCCAAAGACTCAAATATAGTAAATAAAGAAGGTGGTAAGACCCTTGCAGAGTTCCCCAACAGCATAGAGCTTGGGAAGCTCGGATCCGG
TCAAGATCTATTTAGGAGGAAGCGCTCCATACCAAGAATTAGAGTTCAACTAATTTGAATTAGTGCCACATAGGGCTTTATTTAGGAGGAAGTGCTCCAT
ACCAAGAATTTTTTGTTTAAAGAGTATGGTTGATGAAATAAAGTTTCTTTTGAAAATTATTTTTCA