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Detailed information on CNT3094104


BLAST search results

BLAST vs Swiss-Prot:
sp|P31853|ATPF2_SPIOL, E-value = 4e-45

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30512480Solanum tuberosumJuglans regia22.8723.8980.6134forward
CNT30703592Solanum tuberosumQuercus lobata17.2422.984.16101forward
CNT30617718Solanum tuberosumSesamum indicum32.0813.7480.85188forward
CNT30635730Solanum tuberosumCapsicum annuum20.3117.1789.92119forward
CNT30599104Solanum tuberosumFraxinus excelsior37.7170.1681.9221forward
CNT30411806Solanum tuberosumPapaver somniferum39.7636.0779.4233forward
CNT30725655Solanum tuberosumLupinus angustifolius27.651781.48162forward

Expression of CNT3094104

Peptides detected in this lncRNA

>peptide 1 (96 aa)
MRNRNSAIMIGSVKLKSKREAFSISSASEGGAMANELARMTEMDLRVDGIERVSRDLGIWVRESLNLGDGGMVEDEEVIKTLEELIIMLAMASSSFS

Sequence

>CNT3094104
GTCTCCTCCTTTTGACTCTCTAAGCTAGCCAAAGCTTCTTGCAATTCAGCCTCAACTTTCTTCCTTCCTTCTGCAATCTTCTGTTCTACTTCTTGCTGAG
TCTCTTTCTTCATCTTGTTCAATGCTGCTGATATCTCAGCCCTTGCAGCCTTCATAATTGCAGCAGCTTGGTCTTCCAGTTGCTTCACTTCAGCAGATGT
GTCCTTCACACTGCTCAATTTCTCCTTAATGGCAGAATCTCTTTCATCCATGAATTTCCCTAATGGGCTGAAGTAAATCTTGTCTAAAGCAAACATGAGA
AACAGGAATTCAGCCATCATGATTGGGAGTGTCAAGTTGAAATCAAAAAGGGAAGCTTTTTCAATTTCTTCTGCTAGTGAAGGTGGTGCCATGGCCAATG
AGCTTGCAAGAATGACTGAAATGGACTTGAGAGTTGATGGGATTGAGAGGGTTTCAAGGGATTTGGGGATTTGGGTGAGGGAAAGTTTGAATCTTGGAGA
TGGAGGGATGGTGGAAGATGAAGAAGTGATTAAGACTTTGGAGGAGCTCATCATCATGTTGGCCATGGCTTCTTCTTCTTTTTCTA