Detailed information on CNT3093690


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30566785Solanum tuberosumActinidia chinensis2.3134.5985.8792forward
CNT30606370Solanum tuberosumGossypium raimondii2.7853.1185.59111forward
CNT30625473Solanum tuberosumDaucus carota2.7833.7485.59111forward

Expression of CNT3093690

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MNKNLAKLHTPSKECCLSLLSETKEKNHVRLAMSAGKKRHIKIEIVYRPYSDTSVEI*

>peptide 2 (51 aa)
MIKIQVQIFKKIVFSDFENLNSRGSSMGLNNTTYFCGSFDLRLPNIVATYI*

>peptide 3 (65 aa)
MTFIDSEMEKECAIHSSMFSLYTNPWQQLFGIWRMQESYPYDSLPFNTISRIKTDSYNQRSIQSK*

>peptide 4 (30 aa)
MEVFHESNLTNFTPKDRFHIFRQSRRLKRF*

>peptide 5 (32 aa)
MIHYPLILSQELKQIHIIKDQFNQNNVHLINQ*

>peptide 6 (34 aa)
MSHPCQILQIYTTFGEFDMHPLIFLKSPNNIGEH*

>peptide 7 (36 aa)
MVNFAFMQLLVTIRSWNILENIHMLKCDKFKNGILR*

>peptide 8 (37 aa)
MNKLCFNISSHRALKKLYSSTVHMVVFCISFLVTQTA*

>peptide 9 (30 aa)
MCNSLINVLFVYESLATIVWHMEDARKLPL*

Sequence

>CNT3093690
TCAGCTCTAAAGTAATCAAATTTCAAAATTACAGGGGGGCAATGAAACCACGGTAACCCAGACAATATCATCAAGTTGTCCACAAATATAATACAGATAA
AAAATCTCAAAAAAAATCATATTGTTCTAAAATAATCACATTTCAAAATCACAAAGAACCTTGACACTACAGTATCCTAGAGGATCACCTTAAGCTATCC
ACGAAGACAATATAGATTAAAAAAACCTCTAAATAGAAATTCAACTGCGCTATAAAATAATCAAATTTTAAAATCATAGAGAGTGATGGCACTACGGTAT
CCTAGAAGATCACGCTAAGCTATCCACGAAGACAACACATATAAACAACTTCAAAAAAGGATGTCTATACAGTATCCTAGACGATCAAGTTAAGTTATCC
ACAAATACCATAAAAGTCCTCAGATTAATTCTTAAATAATCAAATTTCAAAATCACAAAAATCATGGCACCACAGTACTCCAAAAGATCACATTATTCTA
TCTACGAAGATAATAAAAATAATTGAAATTTCTATAAAATAGTCAAATTTCAAAATCACAAAGTGCGTGAAACTACAATATCTTAGATGATGATGTAAAA
ATACACAAAGAGAAAAAAAAATTACTCTGAGACTTGCATCTAAAGAACTGTTGATGAGTTCATGGAGAAAGATCTCCTTGTAGCTGTAGAAAAGTGTCGA
TAATAGGACTGAGAAGCTGATTGATCTCAGCTTGGAAAGCAAATGTCGTTGTGTCCGCCATTTTTGGTAGATCTTAAGAGTTGTTGCTACTACGAAAAAG
AATCTTAGGGGAAGTGAAACACAGAGGGACTCAAAATCTAGAGAGGGTTTATGGGCAGTTTTATGTAACTTTATATTGAGAGCAACTTACTTGAAATGCT
TTCCAAACCATTTCAACATGTCTTGTTATAGCCTCATCAGCTAATTTTACACTATTCACATGTAACCCTTAAAATTTGATAAGTGTCTGTGAAGTTACAT
GCGAACACCATGTAATACACTCATTTTTCTACTCACAAAGACTGAAAAAATTGATTCAAGTTGCACCTATTTTCAATACAAATGAAAGTTAGAAAGAAGA
AAAGATTTCAAGGACACAAGCAAATAATCCGTTGAAAAATACATATTTTTGAGAAATTATGAATAAGAATCTTGCCAAACTTCATACTCCAAGCAAAGAG
TGTTGCCTATCTTTATTATCTGAAACCAAAGAAAAAAATCATGTTAGATTGGCAATGAGTGCTGGAAAAAAAAGGCATATTAAAATTGAAATTGTTTATC
GACCCTATTCTGACACCTCTGTAGAAATCTAAGTTGTACAAACACTTCACTTTTGATGTCGCACCCATGTCAGATTCTCCAAATATACACTACTTTTGGA
GAATTCGACATGCACCCATTGATATTTTTGAAGAGTCCGAACAATATAGGTGAACACTGAATGAAAAGATCAGTCTCACGAAAAATGACTCACTCATCTA
GCACACCTAAAGATTAAAAGTAATCAAGTAGTTCATCGAAGAGAAGAGCAAGATACAAATCAATTTAGGGTCCAACTGTTTGAGTCATCAATAAATTATG
CCCATAAAGCTTGAATCTAAAGTAGCTCAAAATGTAAATATTTTAATCAAACATTAAAAAAAGATAGTTAATTGGCTAGAAGATTGGATATAATACATTA
AGGTTAATTACTTGTATTTAATAAGGGGAGTTTAATGAATCAAATGTGCCACAATCTCAAATTAGTTGCAGTATCTTCTATATTCACATTCACTTTATCA
TAGATAAAACTATGAAAGATGGAAACTTTGAGGCAACAATACCTTTTTGAATGAAGATCGTGTCTCCTTCTTTTACTCATTTTATTGTTCTTTTTCTTTA
AGCTTCTCCGGTGAATCCTCGACTCCCATCCTCCTTTAGCCTTCTTTTGTACATGTTAGATAATTTTTCGTACAATTTGCTGAAGTCAGAGTCTAAATGA
TTATATGTATGTTGAAAATGTGAATACTGAACTGAAATGCTATAGATGAAAGAGTGATTTTACTTGATACAAACTTTTTAAGCCCTCTCGCAATGTGATT
CATTCCAACCTTATAACCCAAGAAAGAAGTCAACTTGCAGGGTTTGGTTGTATCATAGATGACGGATAAGGGAAAACTCAAAATATTTACTAAAGAGTAA
AAGGTGCAGAAGTTGTAGAGAAGCTAAATTGCCAAACAAAAAAGTAGAAGGTTGCAAATGGTAAATTTTGCATTTATGCAGCTTCTGGTAACTATAAGAT
CTTGGAACATATTAGAGAACATACATATGTTAAAATGTGATAAATTCAAGAACGGAATCCTACGCTAGCTTATTGTCTTCTTTAATATTGTCTCGTATGA
GTACAAAGAAACTTATGCTATCAAATATTTTCTGGTCTATAGGTTAACCCTCGATTTACGTGCTTAATGACCTTTATTGATTCAGAAATGGAGAAAGAAT
GTGCAATTCACTCATCAATGTTCTCTTTGTATACGAATCCTTGGCAACAATTGTTTGGCATATGGAGGATGCAAGAAAGCTACCCTTATGATTCATTACC
CTTTAATACTATCTCAAGAATTAAAACAGATTCATATAATCAAAGATCAATTCAATCAAAATAATGTACACTTAATAAATCAATAACAGACACAAAGATA
GACAATCATCAATCACGTAATCACTCGAAGGGTCTAATAAGGCCGCAATTAAAAGATGGAAGTATTTCATGAATCAAATTTGACGAATTTTACTCCAAAA
GATAGATTTCATATCTTCCGTCAAAGTCGAAGGCTTAAAAGATTTTGAAAAAATCTCACCTTTGAAGCATGATCAAAATTCAGGTTCAAATCTTTAAAAA
AATAGTCTTTTCAGATTTTGAAAATCTAAATAGCAGAGGCAGTTCTATGGGGCTTAATAATACCACTTACTTTTGTGGGAGTTTTGATTTGCGTCTTCCA
AATATAGTAGCTACCTACATATAAATTTCATAAACATTATTCATTTTCATCAATTGTAATACATAGTGACAATGAACTCGAAGTTCTATTGAACATTTGT
TGAACGGTAAGTAATCATTATGAGCAGTTCGAGTACTTCTCGAGATGAACAAACTTTGTTTCAATATAAGTAGTCATCGGGCTCTTAAAAAATTGTATAG
TTCCACCGTTCATATGGTTGTTTTTTGTATTTCATTCCTCGTCACTCAAACAGCTTGAGAGTAAAGATACTAAACAACAGTATGTAATCAATGGTGAGAA
TTCCATAACAAGTTTGTTTTGGGGATTTCAGGCAATATTTTCAGATTGAACTTTCTAATTTAGTATCTGAAATTGTCATTATTAATTCTTTATTTTGTAA
ATTCTAACTCATCTAGAGTTATCAAAAGCAAATTGAAAGATATTTCAAATGAAATCAATTTTGTCAATAATTTTTTAACTTTAAGTATTCTGATTATAAC
CACTAAGCAATTTTTGCACATTACAGAGGTATGAACCGATATATGTTATAGCATGATCACTTTCTTTATGAAATAACATAAGCACATTACGGCCACTTCA
ATGATGTCTACAAGTGAAACTCTGCTTAACATGATATTGGAACCTTAATACATAACAACGCCACAAAGTAGGAATGAGCTTCTAAGCAACTATTTTCCCT
ACAATGCTAGGGTTAGCACCTAGCAGTCAATGATTTGCAGTGAATTACAACATAAATTTAGTGTGTCCAACTTTTAGAATTTTCCAAACAAAATATGAGC
AAAAATTAACGAAACACTCACATCCAGTAACCTTGAACAAACACTTCACAATTTGGAGTCTCCTGACAAATACAAAATTCAAGAAACTTTAAATGATAAT
TAAGAGACATGCATGAAAATTGATGAGCAAACACTGCGATAAATCAATAAGAGAAGTAGTAAATTAGCGGAACAAAATAAGGTACGGGACT