Detailed information on CNT309351


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30596912Zea maysOryza meridionalis22.4924.1187.13101forward
CNT30369646Zea maysOryza glumipatula44.137.2285.35198forward
CNT30577459Zea maysOryza barthii23.8320.7885.98107forward
CNT30115905Zea maysOryza nivara44.137.0184.85198forward

Expression of CNT309351

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MPAAMPFMVRMRVSSRPGAYSLCWFSCTSSAG*

>peptide 2 (66 aa)
LASTASTQEKGSDMKNPPEHTGAGVLTAHRPTHIVHRLMGDRLFAHRRSWPSRCSACRRRCPSWSG*

Sequence

>CNT309351
CCTTGGCATCTACAGCAAGCACACAAGAGAAAGGCTCTGACATGAAAAATCCTCCAGAACACACTGGCGCCGGTGTACTAACTGCTCACAGGCCTACACA
TATCGTCCACCGTCTCATGGGAGACAGGTTATTTGCACACCGAAGATCTTGGCCTAGCCGGTGTTCTGCATGCCGGCGGCGATGCCCTTCATGGTCAGGA
TGAGGGTGTCCTCCAGGCCTGGAGCGTACTCGCTCTGCTGGTTCAGCTGCACCAGCTCCGCCGGCTGACTCTCGTCGGTGAACTCCTTGGACAGGGGCGG
CTGCGGGCTCACCTGGAAGCTCGGGTCGCGTATCCGCTTCAGGGTGTAGGACTCACGCAGCCGCAGACGCTGCTTCAGATAAGGATCACCTTCAAGGACG
TCCTTGTGACCAGCAACCTGCAGCGAGAGATGGCAAAAATTGGGATAAT