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Detailed information on CNT3092339


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 3e-115

BLAST vs NONCODE:
NONMTRT001605, E-value = 4e-103

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30176337Solanum tuberosumVigna angularis44.3925.7487.36261forward

Expression of CNT3092339

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MENIASLPFLISLTLSSAKASGSSARPNGSKLPPG*

>peptide 2 (37 aa)
MGQSYHQGKVGQQPHQEAHQQYGNLQRLPSTQLGKPR*

>peptide 3 (47 aa)
MDQAWVAQVVKSTLAENLGSSLEPYSFAKLDTVTGQKLRKDTSKSSKH

Sequence

>CNT3092339
ACCAAATAAAAATTTCATATATAATCTCCTGTAATTTGCAGTAGCTAGCTATACAATGGCCTATCAAACAAACAAATACTAGAAGAGGCTCTATTTCAAG
AAGTTCACTTTCCGGGGACAAAGTTTGTGGCAAAGGCCCAGGCATTGTTGTTAACGGGGTCAGCAAGGTGGTCGGCAAGGTTCTCCAATGGACCCTTTCC
GGTGACAATAGCTTGGACAAAGAATCCAAACATGGAGAACATAGCAAGTCTTCCGTTCTTGATTTCCTTAACCTTGAGCTCAGCAAAAGCCTCTGGGTCG
TCAGCAAGGCCCAATGGGTCAAAGCTACCACCAGGGTAAAGTGGGTCAACAACCTCACCAAGAGGCCCACCAGCAATACGGTAACCTTCAACGGCTCCCA
TCAACACAACTTGGCAAGCCCAGATAGCCAAGATGCTTTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTGAAAATTTGGGA
TCCAGCCTTGAACCATATAGCTTCGCCAAACTTGACACCGTTACGGGCCAAAAGCTCAGGAAAGACACATCCAAGAGCTCCAAGCATG