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Detailed information on CNT3092013


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 2e-50

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30154007Solanum tuberosumPrunus persica55.3386.8584.86218forward

Expression of CNT3092013

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MGQSYHQGKVGQQPHQEVHQQYGNPQRLPSTQLGKPR

Sequence

>CNT3092013
CACCACATTACAATAATCTTGTACTGAACCCATAACCCAGAATGCTTTTAAAAAACTGACCCCTTCTATAGATTCATCTCTCACAAAGCTAAAAACTCAT
AATCTCCACTAACTGGAGATTAGAGATCAACATTTTGTTAAGCTCACTTTCCGGGAACAAAGTTTGTGGCAAAGGCCCAAGCGTTGTTGTTAACTGGGTC
AGCAAGGTGGTCGGCAAGTCTGCCATTCTTGATTTCCTTAACCTTGAGCTCAGCAAAAGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCAAAGCTACCA
CCAGGGTAAAGTGGGTCAACAACCTCACCAAGAGGTCCACCAGCAATACGGTAACCCTCAACGGCTCCCATCAACACAACTTGGCAAGCCCAGA