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Detailed information on CNT3091928


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT001030, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30547959Solanum tuberosumIpomoea triloba99.8787.2295.98771reverse complement
CNT30283203Solanum tuberosumChenopodium quinoa99.8750.5995.46771reverse complement
CNT3021657Solanum tuberosumCitrullus lanatus99.3552.3595.57767reverse complement
CNT30730472Solanum tuberosumCorchorus capsularis99.8779.7395.2771forward
CNT30381574Solanum tuberosumManihot esculenta98.1995.2393.01758forward
CNT30639077Solanum tuberosumCapsicum annuum99.7446.0898.57770reverse complement

Expression of CNT3091928

Peptides detected in this lncRNA

>peptide 1 (53 aa)
VTKGCISVDRGSKATLPLTIPRRVFKSSAKDSTRRSMEIVLQGGHRDASVAAT*

>peptide 2 (94 aa)
MIGRADIEGSKSNVAMNAWLPQASYPCGNFSDTSSFEFRRSKGSLGHAFTVRIRTGNQNQTSFYPSVPHEISVLVELILGHLRYLVTDVPPQPNS

Sequence

>CNT3091928
GTGACAAAGGGTTGTATCTCAGTGGATCGTGGCAGCAAGGCCACTCTGCCACTTACAATACCCCGTCGCGTATTTAAGTCGTCTGCAAAGGATTCTACCC
GCCGCTCGATGGAAATTGTACTTCAAGGCGGTCACCGCGACGCTTCCGTCGCGGCGACTTAGCCAACGACACGTGCCCTTGGGGGCCAGAGGCCCCTACT
GCGGGTCGGCAAGCGGACGGCGGGCGCATGCGTCGCTTCTAGCCCGGATTCTGACTTAGAGGCGTTCAGTCATAATCCAGCACACGGTAGCTTCGCGCCA
CTGGCTTTTCAACCAAGCGCGATGACCAATTGTGTGAATCAACGGTTCCTCTCGTACTAGGTTGAATTACTATTGCGACACTGTCATCAGTAGGGTAAAA
CTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCAACACTTGGTGAATTCTGCTTCACAATGATAGGAAGAGC
CGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCGAATTC
CGAAGGTCTAAAGGATCGTTAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTCTGTTCCACACGAGATTT
CTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTGTAACAGATGTGCCACCCCAGCCAAACTCCC