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Detailed information on CNT3091866


BLAST search results

BLAST vs Swiss-Prot:
sp|P07369|CB2G_SOLLC, E-value = 6e-113

BLAST vs NONCODE:
NONMTRT001605, E-value = 8e-105

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30269348Solanum tuberosumChenopodium quinoa35.4660.0486.33278forward
CNT3046345Solanum tuberosumPrunus dulcis33.5553.5689.73263forward

Expression of CNT3091866

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MENIASLPFLISLTLSSAKASGSSARPNGSKLPPG*

>peptide 2 (37 aa)
MGQSYHQGKVGQQPHQEAHQQYGNLQRLPSTQLGKPR*

>peptide 3 (47 aa)
MDQAWVAQVVKSTLAENLGSSLEPYSFAKLDTVTGQKLRKDTSKSSKH

Sequence

>CNT3091866
CATTTTTTCAACTTCTTACTATTAATGACTTAGATTTAATCAACAAACATTAGGTCTTAACCATATGGTTAGGATAATCTTCTCTTTTTTATTTTTTAAA
TCATGGCCTAGTTATAACCAATGTTACATAATTTAACACTGAAGATGGAGACAAGATAAAACTTTCTAAGTACATGCAACCTTGCAGTTAGCCTGATGGC
AAAAAGCTTCATATATAATCTCTAGTAATTTACAATTGCTAGGTTTAAAAGGTCATCAAACAATAAGATACTAGAAGTAACATTTTCTCTCTCAAGAACT
TCACTTTCTGGGAACAAAGTTTGTGGCAAAGGCCCAAGCGTTGTTGTTAACTGGGTCAGCAAGGTGGTCGGCAAGGTTCTCCAATGGACCCTTTCCGGTG
ACAATAGCTTGGACAAAGAATCCAAACATGGAGAACATAGCAAGTCTTCCGTTCTTGATTTCCTTAACCTTGAGCTCAGCAAAAGCCTCTGGGTCGTCAG
CAAGGCCCAATGGGTCAAAGCTACCACCAGGGTAAAGTGGGTCAACAACCTCACCAAGAGGCCCACCAGCAATACGGTAACCTTCAACGGCTCCCATCAA
CACAACTTGGCAAGCCCAGATAGCCAAGATGCTTTGTGCATGGACCAAGCTTGGGTTGCCCAAGTAGTCAAGTCCACCCTCGCTGAAAATTTGGGATCCA
GCCTTGAACCATATAGCTTCGCCAAACTTGACACCGTTACGGGCCAAAAGCTCAGGAAAGACACATCCAAGAGCTCCAAGCATG