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Detailed information on CNT3091778


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 6e-180

BLAST vs NONCODE:
NONSTUT001352, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316082Solanum tuberosumCorylus avellana71.7669.1985.41658forward
CNT30500907Solanum tuberosumCoffea canephora73.2871.7986.46672forward
CNT3046618Solanum tuberosumPrunus dulcis72.4179.4381.78664forward
CNT30153357Solanum tuberosumPrunus persica71.7637.2682.37658forward
CNT30705057Solanum tuberosumPrunus avium61.468.0882.59563forward

Expression of CNT3091778

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MPLDHQQDLMGQNCRQGRVGRRPHQEVHLQYGIPQQLPLTQLGKPKWPRCFVHGPSLGCPSSQVHPR*

>peptide 2 (68 aa)
MDQAWVAQVVKSTLAEDLGSGLEPHSLAELDTVTGQELREDTSKSTKHCPSAVDHLKFTVLGKGLRVC*

Sequence

>CNT3091778
CAAACAATGAAATTTATGGAATGTTTGCTGATATTCATTTTCCGGGAACAAAGTTTGTGGCGTAGGCCCAGGCATTGTTGTTGACTGGATCTGCAAGGTG
GTCAGCAAGGTTCTCCAATGGACCCTTTCCGGTAACAATGGCCTGAACGAAGAATCCAAACATAGAGAACATAGCAAGTCTGCCGTTCTTAATCTCCTTT
ACTTTGAGCTCAGCAAATGCCTCTGGATCATCAGCAAGACCTAATGGGTCAAAACTGCCGCCAGGGTAGAGTGGGTCGACGACCTCACCAAGAGGTCCAC
CTGCAATACGGTATCCCTCAACAGCTCCCATTAACACAACTTGGCAAGCCCAAATGGCCAAGATGCTTTGTGCATGGACCAAGCTTGGGTTGCCCAAGTA
GTCAAGTCCACCCTCGCTGAAGATCTGGGATCCGGCCTTGAACCACACAGCCTCGCCGAACTTGACACCGTTACGGGCCAAGAGCTCAGGGAAGACACAT
CCAAGAGCACCAAGCATTGCCCATCTGCAGTGGATCACCTCAAGTTCACGGTTCTTGGCAAAGGTCTCAGGGTCTGCTGAAAGTCCAGCGGTATCCCATC
CATAGTCACCAGGGAATTCGCCAGTCAAGTAGCTTGGGGACTCACCAGAGAATGGGCCCAAGTACTTAACACGGTCAGGGCCATACCATGGGCTGCTAGA
TGGGGCAGACTTGGCGACAGCCTTTCTCATAGTGATCCTTCCATTTCCAGAAATTTCTGAGGCAGAGGGTGAGAGTTTCACTGCCTGTCCAGCAAAAGAA
GGGGAAGAAAGAGCCATTGTAGCAGCTGCCATGGTTTATAAAGAGAGGAAAGTGAGGGGGTTGCTAGTTTGATATGTAAAAGTTAGTTGTGATGAGCTGA
AGTTATTGAAACTTCAC