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Detailed information on CNT3091701


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640872Solanum tuberosumNymphaea colorata79.6179.9279.17605forward
CNT30549166Solanum tuberosumIpomoea triloba90.26102.0880.61686forward
CNT30500730Solanum tuberosumCoffea canephora81.1871.4182.5617forward
CNT30379091Solanum tuberosumManihot esculenta46.3259.6682.95352forward
CNT30628702Solanum tuberosumVigna unguiculata76.9785.480.68585forward
CNT30489068Solanum tuberosumOlea europaea49.2175.7180.75374forward
CNT30235097Solanum tuberosumBrassica oleracea62.2459.0581.18473forward
CNT30311670Solanum tuberosumCamelina sativa52.8972.9679.6402forward
CNT30607691Solanum tuberosumGossypium raimondii72.7681.6881.37553forward
CNT30476941Solanum tuberosumArabidopsis halleri65.7962.4279.4500forward
CNT3051702Solanum tuberosumAmborella trichopoda62.6377.7879.2476forward
CNT3049385Solanum tuberosumCucumis sativus59.8757.4580.44455forward

Expression of CNT3091701

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MLDYNWVMWVSMKDWLENMLDLSGCSQGSWGYKWGKWGCNQEMWGCNRGKWGCILERSGCNQGMMGCNQGMMDCNQGMK*

>peptide 2 (53 aa)
MQEKLDYMMEKSDYKRVRWGYMKVMWGCKKVKWGCKMAKWGCMPEKWGCMPEK*

Sequence

>CNT3091701
CATGTATCAAACCAAGGTTGTTTACCTGTAACTTGGAGATGACGGGCTGTATGGACTAGAAGGAGACAGCTTCGGGCTGGTTGGCGAATATGCAAGGGAG
GGGCTGTATCTCGCCGAGGGATTGTAACTTGGTGATGTAGGACTGTAGGATGGTGATGTTGGGCTATAGCTGGGAGATGTTGGGCTGTAACCAGGGGAGG
TAGGACTGTATGCAGGAGAAGTTGGACTATATGATGGAGAAGTCGGACTATAAGAGGGTGAGGTGGGGCTATATGAAGGTGATGTGGGGCTGTAAGAAGG
TGAAGTGGGGCTGTAAGATGGCGAAGTGGGGCTGTATGCCGGAGAAGTGGGGCTGTATGCCGGAGAAGTAGGGCTGTAGCTAGGTGATGTTGGGCTATAG
CTAGGCGAGGTTGGGCTATAGCTTGGAGATGTTGGACTATAACTGGGTGATGTGGGTGAGTATGAAGGACTGGTTGGAGAATATGCTGGACTTGTCGGGC
TGTAGCCAGGGGAGCTGGGGCTATAAGTGGGGGAAGTGGGGCTGTAACCAGGAGATGTGGGGCTGTAACCGGGGGAAGTGGGGCTGTATCCTGGAGAGGT
CGGGCTGTAACCAGGGGATGATGGGCTGTAACCAGGGGATGATGGACTGTAACCAGGGGATGAAGTAGGAGAGAAAGCCATGCCACCCACATAAGGAGAA
AATTGAGCATCTGTAATCGGTGACATCCGCATATTTGGGCTGAGCAAATAATTTGGAGAC