Detailed information on CNT3091616


BLAST search results

BLAST vs Swiss-Prot:
sp|P07370|CB2B_SOLLC, E-value = 8e-179

BLAST vs NONCODE:
NONSTUT001352, E-value = 8e-180

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30173248Solanum tuberosumTrifolium pratense34.2965.3586.51430forward
CNT30621493Solanum tuberosumCajanus cajan52.3148.8884.6656forward
CNT30725309Solanum tuberosumLupinus angustifolius52.2378.4486.26655forward

Expression of CNT3091616

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MDQAWVTQVVKSTFTEDLRSSLEPHSLTKLDTVTGQELREDTSKSTKHSPSTVDHLKFTVLGKSLRVC*

>peptide 2 (67 aa)
MLLDHQQDLMGQNCHQGRVGRRPHQEVHLQYGIPQQLPLTQLGKPRWPRCSVHGPSLGYPSSQVHLH*

>peptide 3 (39 aa)
LSGSTLHLYTVIKRPETRECFNIFIFRGQSLWRRTMRCC*

>peptide 4 (50 aa)
CQVAHYIFTRSSNDQKLENVLIFLFSGDKVCGVGPCVVVDWVCKVISKVL*

Sequence

>CNT3091616
ATTGTCAGGTAGCACACTACATCTTTACACGGTCATCAAACGACCAGAAACTAGAGAATGTTTTAATATTTTTATTTTCCGGGGACAAAGTTTGTGGCGT
AGGACCATGCGTTGTTGTTGACTGGGTCTGCAAGGTGATCAGCAAGGTTCTCTAATGGTCCCTTTCCAGTAACAATGGCTTGAACAAAAAATCCAAACAT
AGAGAACATAGCAAGTCTACCATTCTTAATCTCCTTTACTTTGAGCTCAGCAAATGCTTCTGGATCATCAGCAAGACCTAATGGGTCAAAACTGCCACCA
GGGTAGAGTGGGTCGACGACCTCACCAAGAGGTCCACCTGCAATACGGTATCCCTCAACAGCTCCCATTAACACAACTTGGCAAGCCCAGATGGCCAAGA
TGCTCTGTGCATGGACCAAGCTTGGGTTACCCAAGTAGTCAAGTCCACCTTCACTGAAGATCTGAGATCCAGCCTTGAACCACACAGCCTCACCAAACTT
GACACCGTTACGGGCCAAGAGCTCAGGGAAGACACATCCAAGAGCACCAAGCATAGCCCATCTACAGTGGATCACCTCAAGTTCACGGTTCTTGGCAAAA
GTCTCAGGGTCTGCTGAAAGTCCAGCGGTATCCCATCCATAGTCACCAGGGAATTCGCCAGTCAAGTAGCTTGGGGACTCACCAGAGAATGGGCCCAAGT
ACTTAACACGGTCAGGGCCATACCATGGGCTGCTAGATGGGGCAGACTTGGCGACAGCCTTTCTCATAGTGATCCTTCCATTTCCAGAAATTTCTGAGGC
AGATGGTGAAAGTTTCACTGCCTGTCCAGCAAAAGAAGGGGAAGAAAGAGCCATTGTAGCAGCTGCCATGATTTAGATTAAGAGAAAAGTGTTGATAGCT
TGGGGACTCACCAGAGAATGGGCCCAAGTACTTAACACGGTCCGTAGTCACCAGGGAATTCACCGGTCAAGTAGCTTGGGGACTCACCAGAGAATGGGCC
CAAGTACTTAACACGGTCAGGGCCATACCATGGGCTGCTAGATGGGGCAGACTTGGCGACAGCCTTTCTCATAGTGATCCTTCCATTTCCAGTGATTTCT
GAGGCAGAGGGTGAGAGTTTCACTGCCTGTCCAGCAAAAGAAGGGGAAGAAAGAGCCATTGTAGCAGCTGCCATGGTTTATAAAGAGAGGAAAGTGAGGG
GGTTGCTAGTTTGATATGTAAAAGTTAGTTGTGATGAGCTGAAGTTATTGAAAC