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Detailed information on CNT3091554


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3042412Solanum tuberosumPrunus dulcis67.4462.6278.88464forward
CNT3087851Solanum tuberosumVigna radiata65.749.4581.42452forward
CNT30145737Solanum tuberosumMedicago truncatula49.1354.8782.84338forward
CNT30311725Solanum tuberosumCamelina sativa46.5178.8281.56320forward
CNT30605857Solanum tuberosumGossypium raimondii42.1535.7683.1290forward
CNT30681212Solanum tuberosumTriticum urartu51.4575.1680.79354forward
CNT3028162Solanum tuberosumTheobroma cacao32.2739.5783.78222forward
CNT30103004Solanum tuberosumOryza rufipogon47.3832.781.6326forward

Expression of CNT3091554

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MQEKLDYMMEKSDYKRVRWGYMKVMWGCKKVKWGCKMAKWGCMPEKWGCRPEKWGCMPEK*

>peptide 2 (76 aa)
MLGYSLEMLDYNWVMWVSMKDWLENMLDLSGCSQGSWGYKWGKWGCNQEMWGCNRGKWGCILERYKEQLPVPIGAS*

Sequence

>CNT3091554
CTGTAACTTGGAGATGACGGGCTGTATGGACTAGAAGGAGACAGCTTCGGGCTGGTTGGCGAATATGCAAGGGAGGGGCTGTATCTCGCCGAGGGATTGT
AACTTGGTGATGTAGGACTGTAGGATGGTGATGTTGGGCTATAGCTGGGAGATGTTGGGCTGTAACCAGGGGAGGTAGGACTGTATGCAGGAGAAGTTGG
ACTATATGATGGAGAAGTCGGACTATAAGAGGGTGAGGTGGGGCTATATGAAGGTGATGTGGGGCTGTAAGAAGGTGAAGTGGGGCTGTAAGATGGCGAA
GTGGGGCTGTATGCCGGAGAAGTGGGGCTGTAGGCCGGAGAAGTGGGGCTGTATGCCGGAGAAGTAGGGCTGTAGCTAGGTGATGTTGGGCTATAGCTTG
GAGATGTTGGACTATAACTGGGTGATGTGGGTGAGTATGAAGGACTGGTTGGAGAATATGCTGGACTTGTCGGGCTGTAGCCAGGGGAGCTGGGGCTATA
AGTGGGGGAAGTGGGGCTGTAACCAGGAGATGTGGGGCTGTAACCGGGGGAAGTGGGGCTGTATCCTGGAGAGGTACAAAGAACAGCTTCCTGTGCCAAT
TGGTGCAAGCTGACCTAACATGATATTTTCTGTTACACCCCTCAGGTGATCTGACTCTGCAAATACAGCAGCATCGAGAAGAATGTCC