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Detailed information on CNT3091389


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618998Solanum tuberosumSesamum indicum28.686.9393.81113forward
CNT30200883Solanum tuberosumPisum sativum28.687.7992.92113forward
CNT30194088Solanum tuberosumSecale cereale27.1610.9193.46107forward
CNT30212621Solanum tuberosumHelianthus annuus28.686.4792.92113forward
CNT30684056Solanum tuberosumTriticum urartu27.164.4893.46107forward
CNT30481387Solanum tuberosumChara braunii20.567.1483.9581forward
CNT30571978Solanum tuberosumVitis vinifera28.682.4593.81113forward

Expression of CNT3091389

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MPRYCQPSYTDSQNKPSYLFGLLSSQTMRIVESP

>peptide 2 (32 aa)
PRLLMRAFHYRGNIPPWHTQNMGPKIVEEQDL*

>peptide 3 (29 aa)
MAHPEYGAKNCRGAGSVAVAATSYRPYLR*

Sequence

>CNT3091389
TCCTAGATTATTAATGCGTGCATTCCATTATCGTGGAAATATTCCCCCATGGCACACCCAGAATATGGGGCCAAAAATTGTAGAGGAGCAGGATCTGTAG
CGGTCGCTGCTACAAGCTATCGACCTTATCTCCGTTAGTTTTTCAAGATCAGTGAACCCAGATGTTTGACAAAAGCAACACAGAAACATTATTGAAACTA
TCTTAATACATAATCATCTTTAAATTTGTGAGTAAAATATTGAAAATAGCAAGCTGAAAAAGAAAAAAAATTACCGTCCCTATTTTGTACAATGCCTCGC
TATTGCCAGCCTTCATATACCGATTCACAAAACAAACCCTCATATCTATTTGGTCTCTTGTCCTCACAGACCATGAGAATAGTGGAAAGTCCGC