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Detailed information on CNT3091337


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316118Solanum tuberosumCorylus avellana69.3679.2778.98566forward
CNT30516897Solanum tuberosumJuglans regia81.8675.5778.29668forward
CNT30269286Solanum tuberosumChenopodium quinoa56.570.1780.04461forward
CNT3021333Solanum tuberosumCitrullus lanatus64.5889.0278.75527forward
CNT30727661Solanum tuberosumCorchorus capsularis56.7473.9678.19463forward
CNT30403468Solanum tuberosumBeta vulgaris38.1140.1881.67311forward
CNT30710559Solanum tuberosumGlycine max67.0382.8881.17547forward
CNT3042435Solanum tuberosumPrunus dulcis42.0349.5781.05343forward
CNT30304911Solanum tuberosumTriticum aestivum41.5456.6979.65339forward
CNT30508904Solanum tuberosumSolanum lycopersicum74.7598.7194.43610forward
CNT30256655Solanum tuberosumAvena sativa37.0167.2680.79302forward
CNT30216752Solanum tuberosumKalanchoe fedtschenkoi35.4262.4281.66289forward
CNT30648676Solanum tuberosumRosa chinensis56.8662.2882.97464forward
CNT30625720Solanum tuberosumDaucus carota77.0855.0379.17629forward
CNT30596736Solanum tuberosumOryza meridionalis33.3336.0381.62272forward
CNT30370935Solanum tuberosumOryza glumipatula33.3328.181.62272forward
CNT30154791Solanum tuberosumPrunus persica81.8685.9779.94668forward
CNT30408809Solanum tuberosumPapaver somniferum39.5837.3882.35323forward
CNT30573870Solanum tuberosumVitis vinifera75.9887.9480.16620forward
CNT30705859Solanum tuberosumPrunus avium44.7348.8681.92365forward
CNT30642025Solanum tuberosumCannabis sativa40.6964.7281.93332forward
CNT30109704Solanum tuberosumOryza longistaminata26.7239.2183.03218forward
CNT30121049Solanum tuberosumCitrus clementina50.9838.4581.01416forward
CNT30330871Solanum tuberosumDioscorea rotundata31.1335.1381.89254forward
CNT30149986Solanum tuberosumBrachypodium distachyon41.4237.6880.18338forward
CNT30497905Solanum tuberosumDigitaria exilis39.2235.4480.31320forward
CNT30114394Solanum tuberosumFicus carica21.6929.7584.75177forward
CNT30335475Solanum tuberosumCynara cardunculus35.5422.3281.03290forward

Expression of CNT3091337

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MQEKLDYMMEKSDYKRVRWGYMKVMWGCKKVKWGCKMAKWGCMPEKWGCRPEKWGCMPEK*

>peptide 2 (79 aa)
MLDYNWVMWVSMKDWLENMLDLSGCSQGSWGYKWGKWGCNQEMWGCNRGKWGCILERSGCNQGMMGCNQGMMDCNQGMK*

Sequence

>CNT3091337
GAAGGAGACAGCTTCGGGCTGGTTGGCGAATATGCAAGGGAGGGGCTGTATCTCGCCGAGGGATTGTAACTTGGTGATGTAGGACTGTAGGATGGTGATG
TTGGGCTATAGCTGGGAGATGTTGGGCTGTAACCAGGGGAGGTAGGACTGTATGCAGGAGAAGTTGGACTATATGATGGAGAAGTCGGACTATAAGAGGG
TGAGGTGGGGCTATATGAAGGTGATGTGGGGCTGTAAGAAGGTGAAGTGGGGCTGTAAGATGGCGAAGTGGGGCTGTATGCCGGAGAAGTGGGGCTGTAG
GCCGGAGAAGTGGGGCTGTATGCCGGAGAAGTAGGGCTGTAGCTAGGCGAGGTTGGGCTATAGCTTGGAGATGTTGGACTATAACTGGGTGATGTGGGTG
AGTATGAAGGACTGGTTGGAGAATATGCTGGACTTGTCGGGCTGTAGCCAGGGGAGCTGGGGCTATAAGTGGGGGAAGTGGGGCTGTAACCAGGAGATGT
GGGGCTGTAACCGGGGGAAGTGGGGCTGTATCCTGGAGAGGTCGGGCTGTAACCAGGGGATGATGGGCTGTAACCAGGGGATGATGGACTGTAACCAGGG
GATGAAGTAGGAGAGAAAGCCATGCCACCCACATAAGGAGAAAATTGAGCATCTGTAATCGGTGACATCCGCATATTTGGGCTGAGCAAATAATTTGGAG
ACATCATTCCATCATGATACGGGGTTCCACTGATAGGTGAACGCCCAGGTGTCATGCCAAATTCAAGACCACCTTCCATGTAGCTAGGTAATGGTATCTC
AATAGCTTGTTTCAAC