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Detailed information on CNT3091192


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523536Solanum tuberosumSetaria italica51.3763.0179.78356forward
CNT30616442Solanum tuberosumSesamum indicum85.1456.7378.98590forward
CNT30524942Solanum tuberosumPhaseolus vulgaris72.4474.8180.28502forward
CNT30195835Solanum tuberosumPisum sativum30.5983.4682.55212forward
CNT30591858Solanum tuberosumMusa acuminata37.9551.8780.61263forward
CNT30443444Solanum tuberosumAegilops tauschii32.7624.3882.38227forward
CNT30468644Solanum tuberosumSaccharum spontaneum44.1632.5280.39306forward
CNT3017147Solanum tuberosumZea mays27.1326.2984.57188forward
CNT30341749Solanum tuberosumEragrostis tef45.3170.5681.53314forward
CNT30366505Solanum tuberosumSorghum bicolor30.1633.0781.82209forward
CNT30620207Solanum tuberosumCajanus cajan52.2416.8580.11362forward
CNT30410142Solanum tuberosumPapaver somniferum47.7650.382.78331forward
CNT30121063Solanum tuberosumCitrus clementina39.6857.4182.55275forward
CNT30103220Solanum tuberosumOryza rufipogon48.3436.0681.49335forward
CNT30577473Solanum tuberosumOryza barthii39.6850.4681.45275forward
CNT30584594Solanum tuberosumEchinochloa crusgalli46.7552.4382.1324forward

Expression of CNT3091192

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MQEKLDYMMEKSDYKRVRWGYMKVMWGCKKVKWGCKMAKWGCMPEKWGCMPEK*

>peptide 2 (65 aa)
MLDYNWVMWVSMKDWLENMLDLSGCSQGSWGYKWGKWGCNQEMSGCNQGMMGCNQGMMDCNQGMK*

Sequence

>CNT3091192
CTGTAACTTGGAGATGACGGGCTGTATGGACTAGAAGGAGACAGCTTCGGGCTGGTTGGCGAATATGCAAGGGAGGGGCTGTATCTCGCCGAGGGATTGT
AACTTGGTGATGTAGGACTGTAGGATGGTGATGTTGGGCTATAGCTGGGAGATGTTGGGCTGTAACCAGGGGAGGTAGGACTGTATGCAGGAGAAGTTGG
ACTATATGATGGAGAAGTCGGACTATAAGAGGGTGAGGTGGGGCTATATGAAGGTGATGTGGGGCTGTAAGAAGGTGAAGTGGGGCTGTAAGATGGCGAA
GTGGGGCTGTATGCCGGAGAAGTGGGGCTGTATGCCGGAGAAGTAGGGCTGTAGCTAGGTGATGTTGGGCTATAGCTAGGCGAGGTTGGGCTATAGCTTG
GAGATGTTGGACTATAACTGGGTGATGTGGGTGAGTATGAAGGACTGGTTGGAGAATATGCTGGACTTGTCGGGCTGTAGCCAGGGGAGCTGGGGCTATA
AGTGGGGGAAGTGGGGCTGTAACCAGGAGATGTCGGGCTGTAACCAGGGGATGATGGGCTGTAACCAGGGGATGATGGACTGTAACCAGGGGATGAAGTA
GGAGAGAAAGCCATGCCACCCACATAAGGAGAAAATTGAGCATCTGTAATCGGTGACATCCGCATATTTGGGCTGAGCAAATAATTTGGAGAC