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Detailed information on CNT3091171


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3017923Solanum tuberosumZea mays8.5820.7191.3858forward
CNT30356763Solanum tuberosumLactuca sativa17.3121.5987.18117reverse complement
CNT30550344Solanum tuberosumOryza brachyantha8.4324.2689.4757reverse complement

Expression of CNT3091171

Peptides detected in this lncRNA

>peptide 1 (44 aa)
HFTKKEEEKLKEEILGYLFSIGEGVRMMCLAPCMPHTFTNSLID*

>peptide 2 (54 aa)
MHSLNRNLFAERSYKEYDDYIDLLNANYILVLIFLLLNGLLCIQVITSCVLLLY*

Sequence

>CNT3091171
CTCATTTCACAAAGAAAGAAGAGGAGAAATTAAAAGAAGAAATTTTGGGCTATTTGTTTAGCATTGGTGAAGGAGTAAGAATGATGTGCCTGGCTCCCTG
TATGCCACACACTTTCACCAATTCTTTGATTGACTGATCAGTGGGTGGCGTGCGAGGAGCCAAGCATACCACCCGCTTTCTCATTTTCAATTTTTTTCTG
AGATTGCTATATATACTTGTTGATTTGAAAAACAAAAGTCGCTCTAAATTTTCCTCATTTTTTAATTTGTGTGTGTGTTATGTGATTATGTTGCGTTGAT
TTCATCTGTCATTTCTACTTCTAATTTTAAACTAAGGTAATTGTCATTTAATGGTGTGAGCGGAATTTTGCAGAAGTGGTGTCACCCTACTGTTGCAATT
CATCTGGGCGGTAAGATCAAGGAGTATGCTTCCCGATACCTCCCAAGGGAAATCTCTAATTTGAATTTCAAATTGACGGATTAATGTGAGCTTATCCATG
TGGTTATGCACTCTTTGAATAGGAATCTGTTTGCTGAAAGATCCTATAAAGAATATGATGATTATATTGATCTTCTGAATGCAAATTATATACTAGTATT
AATTTTCCTTCTGTTGAATGGGCTTCTTTGTATACAAGTTATAACTTCTTGTGTCTTATTATTATATTAATCGTAT