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Detailed information on CNT3090743


BLAST search results

BLAST vs Swiss-Prot:
sp|Q7FNS4|PSBB_ATRBE, E-value = 4e-98

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30406228Solanum tuberosumBeta vulgaris41.7868.6195.74188forward
CNT30200101Solanum tuberosumPisum sativum95.1127.6890.89428forward
CNT30283847Solanum tuberosumTriticum aestivum95.5631.4889.3430forward
CNT30135381Solanum tuberosumLolium perenne66.4434.6589.3299forward
CNT30679618Solanum tuberosumTriticum urartu38.4423.2289.02173forward

Expression of CNT3090743

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MFLLQYDERLFLLEQKDQNLPRPTLDLQVVLFPLVHKDRTPIFRDHTSLLHEMHQNQSKPPLRE

Sequence

>CNT3090743
TGCTAGCCCAGCACTAACTCTTCGATATATTTCTTGCTGGAAGTACCCCTGATCCCATTGATAACGAGTGGGCCCAAATAATTCAATCGGGGTAGTTGCC
GAACCATACCACATAGTTCCGGCAACAACAAAAGCTGCAAAAAAGACAGCAGCGATACTACTGGAAAGGACGGTTTCAATATTTCCCATACGCAATCCTT
TGTATAGACGTTGTGGCGGACGGACGCTAAGATGGAATAGGCCCGCTAATATGCCCAATGTTCCTGCTGCAATATGATGAGAGGCTATTCCTCCTGGAAC
AAAAGGATCAAAACCTTCCACGCCCCACGCTGGATTTACAGGTTGTACTTTTCCCGTTAGTCCATAAGGATCGGACACCCATATTCCGGGACCATACAAG
CCTGTTACATGAAATGCACCAAAACCAAAGCAAGCCACCCCTGAGAGAAA