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Detailed information on CNT3090649


BLAST search results

BLAST vs Swiss-Prot:
sp|Q3BAI2|YCX91_PHAAO, E-value = 1e-57

BLAST vs NONCODE:
NONBNAT004661, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696475Solanum tuberosumOryza sativa37.640.1695.041028forward
CNT30677083Solanum tuberosumSetaria viridis15.458.893.11421forward
CNT30524664Solanum tuberosumSetaria italica33.566.9194.98916forward
CNT30639555Solanum tuberosumNymphaea colorata56.1489.8796.811535forward
CNT30549212Solanum tuberosumIpomoea triloba20.5918.6699.11563forward
CNT30513456Solanum tuberosumJuglans regia86.9174.8697.262376forward
CNT30500477Solanum tuberosumCoffea canephora66.68100.1198.131823forward
CNT30616920Solanum tuberosumSesamum indicum19.1753.6390.84524reverse complement
CNT30269781Solanum tuberosumChenopodium quinoa99.3191.8896.212715forward
CNT30730500Solanum tuberosumCorchorus capsularis43.1299.3398.221179forward
CNT30196858Solanum tuberosumPisum sativum61.0889.9393.411670forward
CNT30503447Solanum tuberosumNicotiana attenuata41.3767.699.731131reverse complement
CNT30711335Solanum tuberosumGlycine max13.5794.6494.88371reverse complement
CNT3044711Solanum tuberosumPrunus dulcis17.4510099.16477reverse complement
CNT30638683Solanum tuberosumCapsicum annuum18.8710093.99516reverse complement
CNT30291213Solanum tuberosumTriticum aestivum57.2145.0294.761564forward
CNT30225309Solanum tuberosumHordeum vulgare33.1775.2790.96907forward
CNT30400299Solanum tuberosumTriticum turgidum37.648.294.941028forward
CNT30588765Solanum tuberosumMusa acuminata21.9185.8296.83599reverse complement
CNT30511396Solanum tuberosumSolanum lycopersicum22.0966.0196.03604forward
CNT30552690Solanum tuberosumOryza glaberrima25.1344.8795.63687forward
CNT30441975Solanum tuberosumAegilops tauschii22.5377.2995.13616forward
CNT30248027Solanum tuberosumAvena sativa35.1598.6793.34961reverse complement
CNT30664460Solanum tuberosumTriticum dicoccoides13.299.7296.68361forward
CNT30310298Solanum tuberosumCamelina sativa37.4267.0897.851023reverse complement
CNT3062651Solanum tuberosumArabidopsis lyrata25.0282.2198.1684reverse complement
CNT30142438Solanum tuberosumLolium perenne22.4298.0892.66613forward
CNT30655263Solanum tuberosumRosa chinensis61.6393.3593.831685forward
CNT30206724Solanum tuberosumHelianthus annuus53.8467.8398.851472forward
CNT30126841Solanum tuberosumCorymbia citriodora12.6292.7495.94345forward
CNT30713553Solanum tuberosumMalus domestica golden22.1389.7696.53605forward
CNT30627950Solanum tuberosumDaucus carota15.1196.0596.85413forward
CNT30722943Solanum tuberosumTriticum spelta57.3577.8995.61568forward
CNT30364730Solanum tuberosumSorghum bicolor14.4869.8492.68396reverse complement
CNT30596725Solanum tuberosumOryza meridionalis58.0145.9694.891586forward
CNT30154922Solanum tuberosumPrunus persica62.03100.4194.161696reverse complement
CNT30410430Solanum tuberosumPapaver somniferum54.551.596.981490reverse complement
CNT30646402Solanum tuberosumCannabis sativa39.7685.9393.191087reverse complement
CNT30319706Solanum tuberosumAsparagus officinalis98.193.3297.992682forward
CNT3036965Solanum tuberosumCucumis melo11.2342.1799.67307forward
CNT30332807Solanum tuberosumDioscorea rotundata51.4385.1197.231406reverse complement
CNT30148090Solanum tuberosumBrachypodium distachyon52.1249.0595.021425reverse complement
CNT30103033Solanum tuberosumOryza rufipogon56.4799.5593.261544reverse complement
CNT30585638Solanum tuberosumEchinochloa crusgalli22.7540.1894.05622reverse complement

Expression of CNT3090649

Peptides detected in this lncRNA

>peptide 1 (30 aa)
KIHPFSSTLGWHSLKSEGRGSNEERLTVDT*

>peptide 2 (29 aa)
MGHVESRVNQQGPPCKAKYSWVTDSEVVP*

>peptide 3 (56 aa)
MSVKMRTTCTWTERPYEASLFPGIGFGPFLRSLGGRRRRPPSGGARAISEIPLWKG*

>peptide 4 (51 aa)
MLRGVENKHRSGDSRIGQPFELLLNPWAGKRQPGELKHLSSQRKRKQKRFP*

>peptide 5 (44 aa)
MGDKLHRREGNSPDHQLRPLNDRSVIKEVGVQRQPGGLPRSSHP*

>peptide 6 (39 aa)
MFQGLGCSPIKAVRELGSERRETVRSISGVGVRALRGPFP

>peptide 7 (58 aa)
MPLEPRASWFSPKCVEAQQLTGHLGVKHCFGAGRESGTKSRQTLNTRYDLKITGVKVG*

>peptide 8 (68 aa)
MNGAKRSAEAVGCKNTSVGERSALERSLRASGGGRSGSENVGLSNANIGENPMPRKPKGSSARFVHGG*

Sequence

>CNT3090649
ATAAGATCCATCCATTTAGCAGCACCTTAGGATGGCATAGCCTTAAAAGTGAAGGGCGAGGTTCAAACGAGGAAAGGCTTACGGTGGATACCTAGGCACC
CAGAGACGAGGAAGGGCGTAGTAATCGACGAAATGCTTCGGGGAGTTGAAAATAAGCATAGATCCGGAGATTCCCGAATAGGGCAACCTTTCGAACTGCT
GCTGAATCCATGGGCAGGCAAGAGACAACCTGGCGAACTGAAACATCTTAGTAGCCAGAGGAAAAGAAAGCAAAAGCGATTCCCGTAGTAGCGGCGAGCG
AAATGGGAGCAGCCTAAACCGTGAAAACGGGGTTGTGGGAGAGCAATACAAGCGTCGTGCTGCTAGGCGAAGCAGCCTGAATGCTGCACCCTAGATGGCG
AAAGTCCAGTAGCCGAAAGCATCACTAGCTTACGCTCTGACCCGAGTAGCATGGGGCACGTGGAATCCCGTGTGAATCAGCAAGGACCACCTTGCAAGGC
TAAATACTCCTGGGTGACCGATAGCGAAGTAGTACCGTGAGGGAAGGGTGAAAAGAACCCCCATCGGGGAGTGAAATAGAACATGAAACCGTAAGCTCCC
AAGCAGTGGGAGGAGCCAGGGCTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTCATAGGCAGTGGCTTGGTTAAGGGAACCCACCGGAGCCGTA
GCGAAAGCGAGTCTTCATAGGGCAATTGTCACTGCTTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAGTGGAG
GTCCGAACCGACTGATGTTGAAGAATCAGCGGATGAGTTGTGGTTAGGGGTGAAATGCCACTCGAACCCAGAGCTAGCTGGTTCTCCCCGAAATGCGTTG
AGGCGCAGCAGTTGACTGGACATCTAGGGGTAAAGCACTGTTTCGGTGCGGGCCGCGAGAGCGGTACCAAATCGAGGCAAACTCTGAATACTAGATATGA
CCTCAAAATAACAGGGGTCAAGGTCGGCTAGTGAGACGATGGGGGATAAGCTTCATCGTCGAGAGGGAAACAGCCCGGATCACCAGCTAAGGCCCCTAAA
TGACCGCTCAGTGATAAAGGAGGTAGGGGTGCAGAGACAGCCAGGAGGTTTGCCTAGAAGCAGCCACCCTTGAAAGAGTGCGTAATAGCTCACTGATCGA
GCGCTCTTGCGCCGAAGATGAACGGGGCTAAGCGGTCTGCCGAAGCTGTGGGATGTAAAAATACATCGGTAGGGGAGCGTTCCGCCTTAGAGAGAAGCCT
CCGCGCGAGCGGTGGTGGACGAAGCGGAAGCGAGAATGTCGGCTTGAGTAACGCAAACATTGGTGAGAATCCAATGCCCCGAAAACCTAAGGGTTCCTCC
GCAAGGTTCGTCCACGGAGGGTGAGTCAGGGCCTAAGATCAGGCCGAAAGGCGTAGTCGATGGACAACAGGTGAATATTCCTGTACTACCCCTTGTTAGT
CCCGAGGGACGGAGGAGGCTAGGTTAGCCGAAAGATGGTTATCGGTTCAAGAACGTAAGGTGTCCCTGCTTTTTCAGGGTAAGAAGGGGTAGAGAAAATG
CCTCGAGCCAATGTTCGAATACCAGGCGCTACGGCGCTGAAGTAACCCATGCCATACTCCCAGGAAAAGCTCGAACGACGTTAAGCAAGAGGGTACCTGT
ACCCGAAACCGACACAGGTGGGTAGGTAGAGAATACCTAGGGGCGCGAGACAACTCTCTCTAAGGAACTCGGCAAAATAGCCCCGTAACTTCGGGAGAAG
GGGTGCCTCCTCACAAAGGGGGTCGCAGTGACCAGGCCCGGGCGACTGTTTACCAAAAGCACAGGTCTCCGCAAAGTCGTAAGACCATGTATGGGGGCTG
ACGCCTGCCCAGTGCCGGAAGGTCAAGGAAGTTGGTGACCTGATGACAGGGGAGCCGGCGACCGAAGCCCCGGTGAACGGCGGCCGTAACTATAACGGTC
CTAAGGTAGCGAAATTCCTTGTCGGGTAAGTTCCGACCCGCACGAAAGGCGTAACGATCTGGGCACTGTCTCGGAGAGAGGCTCGGTGAAATAGACATGT
CTGTGAAGATGCGGACTACCTGCACCTGGACAGAAAGACCCTATGAAGCTTCACTGTTCCCTGGGATTGGCTTTGGGCCTTTCCTGCGCAGCTTAGGTGG
AAGGCGAAGAAGGCCTCCTTCCGGGGGGGCCCGAGCCATCAGTGAGATACCACTCTGGAAGGGCTAGAATTCTAACCTTGTGTCAGGACCTACGGGCCAA
GGGACAGTCTCAGGTAGACAGTTTCTATGGGGCGTAGGCCTCCCAAAAGGTAACGGAGGCGTGCAAAGGTTTCCTCGGGCCGGACGGAGATTGGCCCTCG
AGTGCAAAGGCAGAAGGGAGCTTGACTGCAAGACCCACCCGTCGAGCAGGGACGAAAGTCGGCCTTAGTGATCCGACGGTGCCGAGTGGAAGGGCCGTCG
CTCAACGGATAAAAGTTACTCTAGGGATAACAGGCTGATCTTCCCCAAGAGCTCACATCGACGGGAAGGTTTGGCACCTCGATGTCGGCTCTTCGCCACC
TGGGGCTGTAGTATGTTCCAAGGGTTGGGCTGTTCGCCCATTAAAGCGGTACGTGAGCTGGGTTCAGAACGTCGTGAGACAGTTCGGTCCATATCCGGTG
TGGGCGTTAGAGCATTGAGAGGACCTTTCCCTAG