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Detailed information on CNT3090370


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546840Solanum tuberosumIpomoea triloba16.0125.7991.1190forward
CNT30515961Solanum tuberosumJuglans regia19.9330.5282.14112forward

Expression of CNT3090370

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MKGGEELGMSSNGKSEVKKMTKPPFRLAKDDTKPLLQDPILRSDPIETEEALLRLPPFPISKPKSQTQ*

>peptide 2 (45 aa)
LSRLENEVIKIINLSVGASKRSLKQLNELFLCTLETIVWRKSKRI*

Sequence

>CNT3090370
CTTTCCCGTTTAGAAAATGAAGTCATCAAAATCATAAATTTGAGTGTGGGTGCTTCAAAAAGAAGCTTAAAACAACTTAACGAGCTCTTTCTTTGTACTT
TGGAAACGATCGTGTGGCGTAAGAGTAAAAGGATATGAAGGGCGGCGAGGAATTAGGCATGAGCAGTAATGGCAAAAGCGAAGTGAAGAAGATGACAAAA
CCCCCTTTCAGACTGGCCAAAGATGACACAAAGCCACTTCTTCAAGACCCAATACTGAGATCAGACCCAATTGAGACTGAGGAAGCTCTCCTCCGCTTGC
CTCCTTTTCCTATTTCTAAACCCAAATCTCAAACCCAGTGATTTTTTTTATTTTTTTTTATCTTTTTATTAATTTTGTATCTGATATGACCCAATTTATT
TGGGCAAAAATTGTGTTTTTGTGTAATTTGAGTGTTCTGCAAAACTTTTTATAAACCCTTTTTACCCAACCATATATTCTCTGCACAAAATATTAGTAGT
TGCGCCCCGGTAGCTTCTTGTCCTTTGATTTCTTTGACTATTTGTTGATTCTTTGTACCTTG