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Detailed information on CNT3090109


BLAST search results

BLAST vs Swiss-Prot:
sp|P33081|AX15A_SOYBN, E-value = 2e-33

BLAST vs NONCODE:
NONSTUT000592, E-value = 1e-77

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30198235Solanum tuberosumPisum sativum21.9610.682.6192forward
CNT30560987Solanum tuberosumActinidia chinensis22.9118.987.596forward
CNT30648720Solanum tuberosumRosa chinensis39.8623.1680.84167forward
CNT30620093Solanum tuberosumCajanus cajan25.5411.1282.24107forward
CNT30113474Solanum tuberosumFicus carica32.9411.683.33138forward

Expression of CNT3090109

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MAFRNVSSCRRLLDYTRHTDSHGRLVQYKMRK*

Sequence

>CNT3090109
TGAATAGTGAGTCTCTCCTAACTAGAAAGGTTACTTCTTTACAAAATTGTGAAAGGAAAAGCCTCAGAACCTACTCAAGCGAGAAGTAAGATTAATGAAC
ACATCCTCACTACAGGGAATTGTCACACCGCCCATTGGATGATTAAAGCCAAATTCTTCCTCAGCTTGACAAAGCAAGTCTTGAAATAAAGGTTGGCTCA
AGAATGAAATGGGGATAACAAATCTCTTTTTCTGCTTCTCCCCAACATAAACAGCAAAATGGCCTTTCGGAACGTCTCCAGCTGTAGAAGACTTCTTGAT
TATACGAGGCATACGGATAGCCATGGTCGTTTAGTTCAATATAAGATGAGAAAATAAGGATGGGGAGAATTAGTAAAGACTCTGAAAGCAGAGAAAGCTT
TGTATGGTTTCAAGTTTTG