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Detailed information on CNT3090022


BLAST search results

BLAST vs Swiss-Prot:
sp|P92996|GL120_ARATH, E-value = 3e-68

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30638659Solanum tuberosumCapsicum annuum80.5284.8988.79562forward

Expression of CNT3090022

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MVMTPGFLATESSKCNGLSLSHIKLKMNKAYWKNEHISRM*

Sequence

>CNT3090022
GCTTAGTACAGATCAAGTAAAATCAGTCAACATGACTGGATAATCTTGAAGTTTATTAACGATTACAAATAAAAACCACGCAAATTAATAATTATAGCAC
CATAGTTTGGCTTATACTAATTTAGTTGTTATCCCACCAGAATTGTGATTGGAGATAATCCACAACTTTCTTATCAATTTGGAATGCTTTTGCAAGAACA
TCATCATTGATAGGTGGATCTGAGCCAAATACTGCATTTGCAATGGTGATGACTCCTGGATTTTTGGCTACTGAGTCCAGCAAATGCAACGGCCTTAGTC
TTTCCCACATTAAACTGAAAATGAATAAGGCCTATTGGAAAAACGAACACATCTCCAGGATGTAGAATCTTGGTAAAGAGCTTGTTCTTCATGTTTGGAC
CCGGGTTCGAAAGGACAAAACCAACATAGAGTGTGCCCTCAAGGACCGTAAGAACCTCAGTTCCTCGAGGGTGAGTATGAGGTGGGTTGAGACCGTACAG
TGCAAAATCAATACGAGCTAAAGAAATGCCTAGAGTGTTGAGTCCAGGCAAGTTGTTGACATTCACAGCAGTCACAACAGATCCAAGTTGATTTGATGTA
TTCCCAGCTACGTTTAAGCCTGATTTGAAGAAGTCATCAGCAGTGACAATCTTTGGATCTTTGCATACTTTTCCATTCACGAAAACTGCATAATAAGG