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Detailed information on CNT3089649


BLAST search results

BLAST vs Swiss-Prot:
sp|P10330|NU5M_OENBE, E-value = 6e-144

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30389925Vigna radiataTriticum turgidum93.554.2792.92763forward
CNT30627905Vigna radiataDaucus carota93.3830.3596.19762forward
CNT30683092Vigna radiataTriticum urartu92.1634.0193.75752forward
CNT30725625Vigna radiataLupinus angustifolius93.3843.8296.72762forward

Expression of CNT3089649

Peptides detected in this lncRNA

>peptide 1 (38 aa)
FSCVSICMHECLCMCVCVKRERGGKPPIFRISCSSDMA*

>peptide 2 (54 aa)
MTLFRSFCNIPVVAARNXVVAPAEVITIKXVGGYSNKEEHLAIMKTPAVTIVAA*

Sequence

>CNT3089649
GTTTTCGTGTGTAAGTATATGCATGCATGAGTGTTTGTGTATGTGTGTGTGTGTGAAAAGAGAACGAGGAGGCAAGCCCCCCATCTTTCGCATATCGTGC
TCATCCGACATGGCATGAATCACCGAACCTGCACTCAGGAATAGTAATGCTTTGAAAAAGGCGTGATTCATTAAGTGAAAGACGCTAACCGAATAGTTAG
AGATGNCGCAAGCAAAGATCATATAGCCTAATTGACTGCAAGTTGAATAAGCTATGACCCTCTTTAGATCGTTCTGTAATATTCCAGTGGTTGCCGCAAG
GAATGANGTCGTAGCTCCTGCAGAAGTAATAACAATCAAAGNCGTAGGTGGGTATTCAAATAAAGAGGAGCACCTTGCTATCATGAAAACGCCAGCTGTG
ACCATAGTAGCTGCATGAATCAAAGCGGATACTAGAGTGGGACCTTCCATAGCATCGGGTGACCAACTATGCGATCCTATCTGTGCAGATTTCCCAACAA
CACCAATAAGAAGTAAAATATGAATAAGAGTTATGGCATTCACTCTCATATTGCAAGAAATCCAAGAATTTCTAGGGGCACTAGCACGAGCAAAAATGGT
TGAAAAGTCTACTGTTTGAAAGAGAGTAAAACAACTCGAAATCCAAGGAGTTAATCCAAAATCACCTACTCGATTGACAGGCATAGCTTTTGTAGCTGCT
TTATCTGCCTGAAGTCGTGTAAACCAGAAATGAATTAACAAATATGAAGCAAGACCTACTCCCTCCCATCCCAGGAATAATTGAAGAGAGTTATCTCTAG
TCACCAACATTGGCAT