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Detailed information on CNT3089455


BLAST search results

BLAST vs Swiss-Prot:
sp|P69325|UBIQP_SOYBN, E-value = 0.0

BLAST vs NONCODE:
NONTPRT002153, E-value = 3e-127

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641251Vigna radiataNymphaea colorata73.6850.6583.93896forward
CNT30528288Vigna radiataEucalyptus grandis74.8467.9184.4910forward
CNT30513318Vigna radiataJuglans regia53.6263.9886.04652forward
CNT30279009Vigna radiataChenopodium quinoa73.6858.6483.59896forward
CNT3019912Vigna radiataCitrullus lanatus74.3454.183.3904forward
CNT30201346Vigna radiataPisum sativum52.5561.9286.7639forward
CNT30710308Vigna radiataGlycine max59.1377.8187.48719forward
CNT3044330Vigna radiataPrunus dulcis73.7773.3484.28897forward
CNT30169912Vigna radiataPistacia vera74.1856.7384.92902forward
CNT30635990Vigna radiataCapsicum annuum74.2643.5683.39903forward
CNT30312626Vigna radiataCamelina sativa70.0765.7484.51852forward
CNT3077383Vigna radiataBrassica juncea72.768.2184.16884forward
CNT30264722Vigna radiataBrassica rapa72.4583.2783.88881forward
CNT30217431Vigna radiataKalanchoe fedtschenkoi72.6265.2185.62883forward
CNT30653057Vigna radiataRosa chinensis74.5968.5684.67907forward
CNT30716337Vigna radiataMalus domestica golden74.1872.884.7902forward
CNT30622898Vigna radiataDaucus carota72.4550.5285.81881forward
CNT30477817Vigna radiataArabidopsis halleri74.1884.382.71902forward
CNT30359535Vigna radiataLactuca sativa74.6753.7683.81908forward
CNT3024139Vigna radiataPopulus trichocarpa70.7280.0782.91860forward
CNT30120072Vigna radiataCitrus clementina61.8464.6684.31752forward
CNT30174705Vigna radiataVigna angularis92.4372.6691.731124forward
CNT30111690Vigna radiataFicus carica71.6378.1283.47871forward
CNT30334111Vigna radiataCynara cardunculus73.8582.0883.18898forward
CNT3050777Vigna radiataCucumis sativus74.192.7983.46901forward
CNT30114931Vigna radiataEutrema salsugineum74.0181.1583.78900forward

Expression of CNT3089455

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MRRCWSGGIPSLSWILAFTLSIVSELSTSRVMVFPVRVLTKICICRGRGRELRKENELVCLELNC

>peptide 2 (37 aa)
IISYYISIKLINNSSKSFHQAKQTNNIVAYYISKVSL*

>peptide 3 (31 aa)
MVSELSTSRVMVLPVRVFTKICMPPRRRRTK*

>peptide 4 (31 aa)
MVSELSTSRVMVLPVRVLTKICMPPRRRRTR*

Sequence

>CNT3089455
GCATAATTAGTTATTATATATCTATAAAGTTGATTAATAACAGCAGTAAATCATTCCATCAGGCAAAACAAACTAATAACATAGTAGCATATTATATATC
TAAAGTTTCATTATAACAAAGGAACAATACAGTCCAACACAAACCAAATTTATTTAAGGGTCAATAAAGACCCAATCCACAGTCCGATTTTGAAGATGTC
TTGAAAGCAGTAAAAAACAGAGATCAGCACAGTCTAAAAGCCCCCTCGTAGACGGAGAACAAGGTGGAGAGTTGACTCCTTCTGGATGTTATAGTCAGCA
AGGGTCCTCCCATCCTCAAGCTGCTTCCCAGCGAAGATCAACCTCTGCTGGTCCGGGGGAATACCCTCCTTATCCTGGATCTTGGCCTTCACATTGTCAA
TAGTGTCCGAACTCTCCACCTCAAGGGTAATAGTCTTTCCAGTGAGGGTCTTCACAAAGATCTGCATACCACCACGAAGGCGCAAAACCAAGTGGAGAGT
TGACTCCTTCTGGATGTTATAGTCCGCGAGGGTCCTTCCATCCTCCAACTGTTTTCCGGCGAAGATCAACCTTTGCTGGTCCGGGGGAATTCCCTCCTTG
TCCTGGATCTTGGCCTTCACGTTGTCGATGGTGTCAGAGCTCTCCACCTCGAGGGTGATGGTCTTGCCAGTGAGAGTCTTCACAAAGATCTGCATGCCAC
CTCGGAGACGGAGAACTAAGTGAAGGGTTGACTCCTTCTGGATGTTATAGTCGGCGAGGGTCCTTCCATCCTCCAGCTGTTTACCGGCGAAAATCAACCT
TTGCTGGTCCGGGGGGATTCCCTCCTTGTCCTGGATCTTAGCTTTCACGTTGTCGATGGTGTCAGAGCTCTCCACCTCGAGGGTGATGGTCTTGCCAGTG
AGAGTCTTGACAAAGATCTGCATGCCACCGCGGAGACGGAGAACTAGGTGAAGGGTTGACTCCTTCTGGATGTTGTAGTCGGCGAGGGTGCGTCCATCCT
CTAGTTGCTTTCCAGCGAAGATGAGACGTTGCTGGTCTGGGGGAATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTGTCAATAGTATCGGAGCTCTC
GACCTCGAGAGTGATGGTCTTTCCGGTAAGGGTCTTAACGAAGATCTGCATCTGCAGAGGGAGAGGTAGGGAACTGCGCAAAGAGAATGAGCTAGTTTGT
TTAGAATTGAACTGTG