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Detailed information on CNT3089434


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000418, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550295Vigna radiataIpomoea triloba69.6295.3941116forward
CNT30519077Vigna radiataJuglans regia74.0563.8994.861187reverse complement
CNT30618587Vigna radiataSesamum indicum61.5193.9993.41986forward
CNT30194621Vigna radiataPisum sativum74.0542.596.121187forward
CNT30585954Vigna radiataMusa acuminata71.9973.7992.291154forward
CNT30356368Vigna radiataLactuca sativa74.1191.8193.351188forward
CNT3027145Vigna radiataPopulus trichocarpa71.369.8794.231143reverse complement
CNT30334961Vigna radiataCynara cardunculus74.1755.9890.581189forward
CNT30724960Vigna radiataLupinus angustifolius58.4595.0395.41937reverse complement

Expression of CNT3089434

Peptides detected in this lncRNA

>peptide 1 (40 aa)
MNRKLGYGAQLRANLDPTKGVGRLRQQDGGHGSRNPLRSA*

>peptide 2 (40 aa)
MQPQSGGKFRPRLNTGERPIANKYREGKMKRTLKRESKSA*

>peptide 3 (39 aa)
MCLGRMWNXHSRSADRLETLTDADSDWWDPLVGCTADRP*

>peptide 4 (69 aa)
AKTLLTRPQVRRGYPLSLSISISGGKETNKDSLKGGAREGESPVVPGPCRTTRRCRRVGLFGNAAPIGR*

>peptide 5 (51 aa)
METAQPEVGSSGWKSTARRVVSGAPPAALENPEDRVPPTPGRTHNRIRSPR*

Sequence

>CNT3089434
GCAAAGACGCTCTTAACGAGACCTCAGGTCAGGCGGGGCTACCCGCTAAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCTTA
AAGGGGGCGCCAGAGAGGGTGAGAGCCCCGTTGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAAT
CGGGCGGTAAATTCCGTCCAAGGCTAAATACTGGCGAGAGACCGATAGCGAACAAGTACCGGGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAA
GAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTGTCTCGGTCGGATGTGGAACGNTCATAGCCGGTCTGCCGATCGACTCGAGACA
TTGACCGATGCGGATTCTGATTGGTGGGATCCCCTTGTGGGTTGCACCGCCGACCGACCCTGATCTTCTGTGAAGGGTTCGAGTGAGAGCATACCTGTCG
GGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGTGATACCGACGTGCAAATCGTTCGTCTGACT
TGGGCATAGGGGCGAAAGACTAATTGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATANCTGGAGCCCGCGGGCGAGTTCTATCGGGTA
AAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGATGGTGCGGCTGCTCTGTTGAGCTGTGCCATGG
AATCGAGAGCTCCAAGTGCGCCATTTTTGGTAAGTAGAACTGGCGATGCGGGATGAACCGGAAGTTGGGTTACGGTGCCCAACTGCGCGCTAACCTAGAC
CCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGCGTAAAAACTCACCTGCCGAATCAACTAGC
CCCGAAAATGGATGNCGCTAAAGNGCGCGACCTATACCNGGCCGTCGGGGCAAGGACCAAGCCCCGATGAGTAGGAGGGCGCGGNGGTCGCTGCAAAACC
CAGGGCGTGAGCCCGGGCGGAGCGGTCGTCGATGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGNGAAAGGTTCC
ATGTGAACGNCACTTGCACATGGGTTAGTCGATCCTAAGGGACGGGGGAAGCCCGTCTGATAGCGCTTTCAGCGCGTACTCCGAAAGGGAATCGGGTTAA
AATTCCTGAACCGGGATGTGGCGGCTGACGACAACGTTAGGGAGTCTGGAGACGTCGGCAGGGGCCCCGAAAAGAGTTATCTTTTCTGTTTAACAACCTG
CCCACCATGGAAACGGCTCAACCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATC
CGGAGGACCGAGTGCCTCCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCAATGGAACAATGTAGGCAAGGGAAG
TCG