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Detailed information on CNT3089315


BLAST search results

BLAST vs Swiss-Prot:
sp|P33081|AX15A_SOYBN, E-value = 6e-39

BLAST vs NONCODE:
NONTPRT003246, E-value = 1e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3090117Vigna radiataSolanum tuberosum13.7221.3184.11107forward
CNT30508399Vigna radiataSolanum lycopersicum13.7250.4784.11107forward

Expression of CNT3089315

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MKVGSRMIQGLQNASFSLQHRLQGDRLPHPYLLKMPFSYQVSGIPLLYVLRLGTIVL

>peptide 2 (36 aa)
MREENVNKVSVPNFLIQIKIHLKIQTSNKEREIISR*

Sequence

>CNT3089315
GGGCTGCTGCTTGACACAGGTGATCAAAAGTTTATCATAACTATAAGTGGGACATCATCATATGAGAGATAATTTCTCACGTACGGCGCTGCCACACGAT
GATAAGTGCAACTGGCTGTAGCAAAATATGAAGATATAAAAATTGTTGTCCCATTCTCAGGCTCATGTTTTTTTTTTTCTTTTATATCAGGCCATGTTAA
ATCATTTTTCTTGTTCAACTATATTGATGAAATCTTGCTCAGGTCGTTCGATTTAAATAAACATATGCTTAGTCAATTTCTTATTCAATATATATATACA
CACACACACTATGAGAGAAGAAAACGTGAATAAGGTTAGTGTTCCAAACTTTCTCATTCAGATTAAAATTCATTTAAAAATTCAGACATCAAACAAGGAG
AGGGAAATAATCTCAAGGTAAGAAACTATGATACAAAAATGTGTCAAGTATATGTCTACATCTAAGTCAGTTCCATCTTCATGCAGTTAGCAGCTATTGA
AGCGAGAAATGATATCTGAGAACACATCTTCTCCACAAGGAATTGTCAGACCACCAGTTGGATGGTCATAGCCAAATTCTTCCTCGGCTTGACTCAATAG
ATCTTGAAATGAAGGTTGGTTCAAGAATGATACAGGGATTACAAAACGCTTCATTTTCTCTCCAACATAGACTGCAAGGTGACCGTTTGCCACATCCATA
CCTTTTGAAGATGCCTTTCTCATACCAGGTAAGTGGAATCCCATTGTTGTATGTGCTGAGACTCGGGACAATAGTGTTAC